Os11g0158700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0158700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.35 | 0.459 | 14.5 | -0.91 | 1.48 | 1.67 | 0.432 | -3.3 | -0.387 | 19.1 | 25 | 754 | -- | -- |
| 97.96 | 0.461 | 14.5 | -0.364 | 1.44 | 1.41 | -0.193 | -- | -0.268 | 19.3 | 25 | 672 | -- | -- |
| 95.71 | 0.456 | 14.5 | -0.833 | 1.44 | 1.67 | -- | -2.8 | -0.367 | 19.1 | 25.03 | 732 | -- | -- |
| 97.66 | 0.46 | 14.4 | -0.355 | 1.43 | 1.43 | -- | -- | -0.271 | 19.3 | 24.78 | 668 | -- | -- |
| 158.93 | 0.587 | 14.5 | -1.33 | -- | 2.95 | -- | -4.78 | -0.589 | -- | 24.6 | 590 | -- | -- |
| 136.33 | 0.547 | 14.4 | -0.0493 | 2.02 | -- | 0.379 | -- | -0.138 | 19.3 | -- | -- | -- | -- |
| 136.72 | 0.548 | 14.4 | -0.0579 | 2.02 | -- | -- | -- | -0.138 | 19.3 | -- | -- | -- | -- |
| 167.38 | 0.603 | 14.4 | -0.572 | -- | 2.55 | -- | -- | -0.398 | -- | 24.53 | 576 | -- | -- |
| 100.77 | 0.468 | 14.4 | -- | 1.49 | 1.31 | -- | -- | -0.228 | 19.3 | 24.9 | 658 | -- | -- |
| 353.3 | 0.878 | 14.4 | -0.0918 | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
| 136.8 | 0.547 | 14.4 | -- | 2.02 | -- | -- | -- | -0.131 | 19.3 | -- | -- | -- | -- |
| 175.63 | 0.617 | 14.4 | -- | -- | 2.45 | -- | -- | -0.319 | -- | 24.64 | 569 | -- | -- |
| 353.52 | 0.878 | 14.4 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.59 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 3 | 95.04 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 14 | 95.19 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 38 | 95.42 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 41 | 95.45 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 52 | 95.47 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 83 | 95.70 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 101 | 95.93 | temperature | 25.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 135 | 96.49 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 192 | 97.55 | temperature | 20.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 221 | 97.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 10 |
| 234 | 98.13 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 239 | 98.22 | temperature | 10.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 269 | 98.55 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 274 | 98.60 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 278 | 98.67 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 291 | 98.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 301 | 98.89 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 308 | 98.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 315 | 99.00 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 321 | 99.04 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 328 | 99.11 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 333 | 99.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 337 | 99.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 340 | 99.20 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 347 | 99.23 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 351 | 99.26 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 357 | 99.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 380 | 99.41 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 390 | 99.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 400 | 99.55 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 401 | 99.56 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 422 | 99.69 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 429 | 99.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 430 | 99.73 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 431 | 99.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 432 | 99.74 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 436 | 99.75 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 4 |
| 439 | 99.77 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 440 | 99.78 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 3 |
| 445 | 99.79 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 468 | 99.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 473 | 99.89 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 474 | 99.89 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 480 | 99.91 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 486 | 99.92 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 495 | 99.94 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 498 | 99.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 508 | 99.97 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 518 | 100.03 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 527 | 100.06 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 544 | 100.10 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 574 | 100.20 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 590 | 100.24 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 646 | 100.43 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 648 | 100.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 18 |
| 653 | 100.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 663 | 100.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 722 | 100.69 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 757 | 100.77 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 794 | 100.85 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 805 | 100.87 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 812 | 100.89 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 853 | 100.98 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 5 |
| 865 | 101.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 17 |
| 882 | 101.03 | wind | 9.0 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 885 | 101.04 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 14 | 13 |
| 887 | 101.05 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 22 |
| 956 | 101.17 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 967 | 101.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 5 |