Os11g0157100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cyclin T1 (Fragment).
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Os11g0157100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cyclin T1 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.18 | 0.142 | 12.1 | 0.028 | 0.304 | -0.237 | -0.14 | -1.34 | 0.0283 | 6.85 | 9.13 | 4619 | -- | -- |
| 9.81 | 0.146 | 12.1 | 0.0062 | 0.3 | -0.104 | -0.137 | -- | 0.0538 | 7.02 | 9.099 | 9755 | -- | -- |
| 9.23 | 0.142 | 12.1 | 0.0267 | 0.304 | -0.239 | -- | -1.35 | 0.0284 | 6.87 | 9.136 | 4618 | -- | -- |
| 9.86 | 0.146 | 12.1 | 0.00711 | 0.298 | -0.0991 | -- | -- | 0.057 | 7.14 | 9.1 | 9773 | -- | -- |
| 13.86 | 0.173 | 12.1 | 0.0256 | -- | -0.258 | -- | -1.32 | 0.0485 | -- | 9.168 | 4369 | -- | -- |
| 10.03 | 0.148 | 12.1 | -0.0606 | 0.301 | -- | -0.146 | -- | 0.0679 | 7.1 | -- | -- | -- | -- |
| 10.09 | 0.149 | 12.1 | -0.0633 | 0.301 | -- | -- | -- | 0.0683 | 7.14 | -- | -- | -- | -- |
| 14.65 | 0.179 | 12.1 | -0.0737 | -- | 0.254 | -- | -- | 0.0683 | -- | 8.803 | 7186 | -- | -- |
| 9.86 | 0.146 | 12.1 | -- | 0.302 | -0.0967 | -- | -- | 0.0568 | 7.15 | 9.076 | 9766 | -- | -- |
| 14.87 | 0.18 | 12.1 | -0.0577 | -- | -- | -- | -- | 0.0736 | -- | -- | -- | -- | -- |
| 10.19 | 0.149 | 12.1 | -- | 0.3 | -- | -- | -- | 0.0754 | 7.16 | -- | -- | -- | -- |
| 14.68 | 0.178 | 12.1 | -- | -- | -0.0873 | -- | -- | 0.0638 | -- | 9.087 | 9777 | -- | -- |
| 14.95 | 0.18 | 12.1 | -- | -- | -- | -- | -- | 0.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 2 | 8.40 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 8.44 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 24 | 8.68 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 25 | 8.68 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 32 | 8.70 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 36 | 8.70 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 40 | 8.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 41 | 8.71 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 42 | 8.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 61 | 8.73 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 64 | 8.73 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 66 | 8.73 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 72 | 8.74 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 87 | 8.75 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 101 | 8.75 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 106 | 8.75 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 161 | 8.79 | wind | 7.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 169 | 8.79 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 212 | 8.81 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 223 | 8.82 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 225 | 8.82 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 255 | 8.83 | wind | 7.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 269 | 8.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 273 | 8.83 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 293 | 8.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 319 | 8.85 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 323 | 8.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 409 | 8.87 | wind | 9.0 | 4320 | < th | dose independent | rect. | 21 | 18 |
| 434 | 8.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 458 | 8.88 | wind | 9.0 | 4320 | > th | dose independent | rect. | 21 | 18 |
| 461 | 8.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 3 |
| 478 | 8.89 | wind | 1.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 479 | 8.89 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 480 | 8.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 484 | 8.89 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 488 | 8.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 491 | 8.89 | wind | 9.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 496 | 8.89 | wind | 9.0 | 4320 | > th | dose independent | rect. | 5 | 10 |
| 498 | 8.89 | wind | 9.0 | 4320 | < th | dose independent | rect. | 23 | 16 |
| 501 | 8.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 505 | 8.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 529 | 8.90 | wind | 1.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 539 | 8.90 | wind | 9.0 | 4320 | < th | dose independent | rect. | 1 | 14 |
| 563 | 8.91 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 585 | 8.91 | wind | 9.0 | 4320 | < th | dose independent | rect. | 4 | 11 |
| 610 | 8.91 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 625 | 8.91 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 10 | 5 |
| 642 | 8.91 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 5 | 10 |
| 659 | 8.91 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 21 | 18 |
| 660 | 8.92 | wind | 3.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 661 | 8.92 | wind | 3.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 662 | 8.92 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 664 | 8.92 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 712 | 8.92 | wind | 9.0 | 4320 | > th | dose independent | rect. | 1 | 14 |
| 719 | 8.92 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 722 | 8.92 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 748 | 8.93 | humidity | 50.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 760 | 8.93 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 811 | 8.93 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 813 | 8.93 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 821 | 8.93 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 11 | 3 |
| 848 | 8.94 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 857 | 8.94 | wind | 9.0 | 4320 | < th | dose independent | rect. | 10 | 5 |
| 933 | 8.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 936 | 8.95 | wind | 9.0 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 962 | 8.95 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 21 | 15 |
| 963 | 8.95 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 977 | 8.95 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 1 |