Os11g0156700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0156700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.58 | 0.445 | 9.58 | 1.17 | 1.78 | -0.977 | -1.26 | -3.01 | 0.775 | 4.2 | 23.07 | 112 | -- | -- |
| 93.54 | 0.45 | 9.53 | 1.62 | 1.75 | -1.2 | -0.795 | -- | 0.879 | 4.24 | 23.86 | 108 | -- | -- |
| 93.26 | 0.45 | 9.57 | 1.23 | 1.77 | -0.956 | -- | -2.3 | 0.782 | 4.21 | 23.1 | 125 | -- | -- |
| 94.56 | 0.453 | 9.53 | 1.63 | 1.73 | -1.19 | -- | -- | 0.902 | 4.23 | 23.6 | 114 | -- | -- |
| 192.7 | 0.647 | 9.5 | 1.86 | -- | -2.7 | -- | -0.292 | 1.06 | -- | 24.2 | 146 | -- | -- |
| 117.82 | 0.509 | 9.56 | 1.41 | 2.23 | -- | -0.189 | -- | 0.748 | 4.14 | -- | -- | -- | -- |
| 117.93 | 0.509 | 9.56 | 1.41 | 2.23 | -- | -- | -- | 0.749 | 4.14 | -- | -- | -- | -- |
| 192.27 | 0.646 | 9.51 | 1.93 | -- | -2.7 | -- | -- | 1.08 | -- | 24.2 | 149 | -- | -- |
| 156.7 | 0.583 | 9.6 | -- | 2.02 | -1.03 | -- | -- | 0.558 | 4.11 | 28.52 | 116 | -- | -- |
| 387.78 | 0.92 | 9.57 | 1.5 | -- | -- | -- | -- | 0.809 | -- | -- | -- | -- | -- |
| 170.45 | 0.611 | 9.59 | -- | 2.26 | -- | -- | -- | 0.592 | 4.13 | -- | -- | -- | -- |
| 287.62 | 0.79 | 9.56 | -- | -- | -2.41 | -- | -- | 0.82 | -- | 24.4 | 150 | -- | -- |
| 447.27 | 0.987 | 9.6 | -- | -- | -- | -- | -- | 0.642 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.80 | radiation | 10 | 270 | < th | dose independent | rect. | 8 | 12 |
| 2 | 83.89 | radiation | 20 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 3 | 83.91 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 19 |
| 21 | 85.51 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 25 | 85.85 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 21 |
| 28 | 86.02 | radiation | 10 | 90 | < th | dose dependent | sin | 21 | NA |
| 38 | 86.47 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 6 |
| 43 | 86.67 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 49 | 86.84 | temperature | 30 | 90 | < th | dose independent | rect. | 16 | 7 |
| 70 | 87.44 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 92 | 87.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 95 | 87.98 | radiation | 10 | 90 | < th | dose dependent | rect. | 9 | 14 |
| 97 | 88.04 | temperature | 15 | 10 | > th | dose dependent | sin | 19 | NA |
| 103 | 88.12 | radiation | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 118 | 88.27 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 7 |
| 172 | 88.83 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 20 |
| 174 | 88.85 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 22 |
| 191 | 88.95 | radiation | 20 | 270 | < th | dose independent | rect. | 24 | 22 |
| 233 | 89.26 | radiation | 10 | 270 | < th | dose independent | sin | 23 | NA |
| 259 | 89.46 | humidity | 60 | 270 | > th | dose independent | rect. | 14 | 6 |
| 280 | 89.59 | humidity | 60 | 270 | > th | dose independent | rect. | 1 | 20 |
| 290 | 89.66 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 20 |
| 295 | 89.68 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 320 | 89.85 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 9 |
| 335 | 89.92 | humidity | 60 | 270 | > th | dose independent | rect. | 2 | 18 |
| 360 | 90.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 15 |
| 363 | 90.08 | radiation | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 376 | 90.16 | radiation | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 421 | 90.35 | temperature | 25 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 426 | 90.38 | humidity | 60 | 90 | > th | dose independent | rect. | 16 | 7 |
| 450 | 90.49 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 19 |
| 462 | 90.54 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 7 |
| 489 | 90.66 | radiation | 10 | 270 | > th | dose independent | sin | 22 | NA |
| 514 | 90.74 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 588 | 90.90 | temperature | 30 | 90 | < th | dose independent | rect. | 7 | 14 |
| 632 | 91.02 | radiation | 1 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 656 | 91.11 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 17 |
| 673 | 91.16 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 21 |
| 676 | 91.17 | radiation | 20 | 270 | < th | dose independent | rect. | 11 | 23 |
| 695 | 91.23 | radiation | 30 | 270 | < th | dose dependent | no | NA | NA |
| 764 | 91.45 | radiation | 1 | 270 | > th | dose dependent | sin | 22 | NA |
| 773 | 91.47 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 776 | 91.47 | radiation | 20 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 782 | 91.49 | radiation | 10 | 270 | > th | dose independent | rect. | 9 | 23 |
| 833 | 91.61 | temperature | 30 | 90 | < th | dose independent | rect. | 9 | 13 |
| 835 | 91.62 | temperature | 25 | 270 | > th | dose dependent | sin | 1 | NA |
| 867 | 91.72 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |
| 896 | 91.80 | humidity | 50 | 90 | > th | dose dependent | rect. | 9 | 12 |
| 986 | 92.02 | humidity | 50 | 270 | > th | dose dependent | rect. | 14 | 6 |