Os11g0155500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter I family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0155500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Amino acid/polyamine transporter I family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 301.88 | 0.816 | 6.26 | -2.2 | 0.762 | -2.46 | -0.315 | 3.31 | -0.233 | 1.12 | 51.26 | 4340 | -- | -- |
| 301.65 | 0.809 | 6.18 | -1.9 | 0.794 | -2.03 | -0.319 | -- | -0.254 | 1.13 | 52.03 | 4634 | -- | -- |
| 301.63 | 0.809 | 6.25 | -2.12 | 0.804 | -2.41 | -- | 3.19 | -0.247 | 1.09 | 51.11 | 4451 | -- | -- |
| 302.12 | 0.81 | 6.19 | -1.89 | 0.832 | -1.97 | -- | -- | -0.269 | 1.21 | 52.08 | 4634 | -- | -- |
| 337.2 | 0.855 | 6.25 | -2.25 | -- | -2.75 | -- | 3.72 | -0.2 | -- | 51.35 | 4106 | -- | -- |
| 362.83 | 0.893 | 6.26 | -1.45 | 0.886 | -- | -0.0954 | -- | -0.574 | 1.12 | -- | -- | -- | -- |
| 362.87 | 0.892 | 6.26 | -1.45 | 0.886 | -- | -- | -- | -0.574 | 1.12 | -- | -- | -- | -- |
| 341.48 | 0.861 | 6.18 | -1.96 | -- | -1.73 | -- | -- | -0.259 | -- | 52.64 | 4017 | -- | -- |
| 341.53 | 0.861 | 6.23 | -- | 0.75 | -1.93 | -- | -- | -0.466 | 0.682 | 64.93 | 8432 | -- | -- |
| 411.51 | 0.948 | 6.24 | -1.42 | -- | -- | -- | -- | -0.556 | -- | -- | -- | -- | -- |
| 418.32 | 0.957 | 6.22 | -- | 0.861 | -- | -- | -- | -0.412 | 1.05 | -- | -- | -- | -- |
| 373.74 | 0.9 | 6.24 | -- | -- | -2.18 | -- | -- | -0.54 | -- | 65.29 | 8308 | -- | -- |
| 464.45 | 1.01 | 6.21 | -- | -- | -- | -- | -- | -0.399 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 302.28 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 22 |
| 3 | 305.47 | humidity | 60 | 4320 | < th | dose dependent | rect. | 16 | 19 |
| 6 | 307.08 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 9 |
| 7 | 307.08 | humidity | 50 | 4320 | > th | dose independent | rect. | 22 | 19 |
| 9 | 307.13 | humidity | 50 | 4320 | > th | dose independent | rect. | 19 | 22 |
| 20 | 307.54 | humidity | 60 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 23 | 307.60 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 26 | 307.75 | humidity | 60 | 4320 | < th | dose dependent | sin | 11 | NA |
| 27 | 308.12 | humidity | 60 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 32 | 308.91 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 33 | 308.96 | humidity | 70 | 720 | < th | dose independent | rect. | 16 | 19 |
| 35 | 309.40 | humidity | 50 | 270 | > th | dose independent | rect. | 5 | 18 |
| 38 | 309.53 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 40 | 309.68 | humidity | 50 | 4320 | > th | dose independent | sin | 10 | NA |
| 43 | 309.95 | humidity | 50 | 4320 | > th | dose independent | sin | 1 | NA |
| 44 | 310.04 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 17 |
| 58 | 310.22 | humidity | 70 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 76 | 310.36 | humidity | 50 | 4320 | > th | dose independent | rect. | 8 | 12 |
| 77 | 310.36 | humidity | 50 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 123 | 310.52 | humidity | 50 | 4320 | > th | dose independent | no | NA | NA |
| 127 | 310.52 | humidity | 50 | 270 | > th | dose independent | rect. | 3 | 22 |
| 129 | 310.53 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 173 | 310.74 | humidity | 70 | 4320 | < th | dose dependent | rect. | 16 | 5 |
| 206 | 310.88 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 21 |
| 252 | 312.05 | humidity | 50 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 254 | 312.19 | humidity | 70 | 720 | < th | dose independent | sin | 11 | NA |
| 261 | 312.43 | humidity | 50 | 4320 | < th | dose independent | sin | 10 | NA |
| 262 | 312.59 | wind | 9 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 268 | 312.73 | humidity | 70 | 720 | < th | dose dependent | sin | 11 | NA |
| 271 | 312.77 | wind | 9 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 309 | 313.54 | humidity | 60 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 310 | 313.54 | humidity | 60 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 317 | 313.67 | humidity | 60 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 321 | 313.70 | humidity | 60 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 338 | 313.74 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 9 |
| 351 | 314.05 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 375 | 314.76 | humidity | 70 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 377 | 314.78 | humidity | 70 | 270 | > th | dose independent | rect. | 16 | 8 |
| 397 | 315.00 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 413 | 315.50 | humidity | 70 | 90 | > th | dose independent | rect. | 17 | 10 |
| 417 | 315.56 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 18 |
| 418 | 315.57 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 432 | 315.86 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 485 | 316.47 | humidity | 50 | 270 | > th | dose dependent | rect. | 9 | 15 |
| 537 | 316.69 | humidity | 50 | 270 | > th | dose independent | rect. | 9 | 14 |
| 550 | 316.81 | temperature | 30 | 270 | < th | dose independent | rect. | 15 | 9 |
| 579 | 317.02 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 599 | 317.19 | humidity | 50 | 270 | > th | dose independent | rect. | 5 | 9 |
| 608 | 317.42 | temperature | 15 | 90 | > th | dose independent | rect. | 23 | 23 |
| 638 | 317.77 | humidity | 60 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 660 | 317.83 | humidity | 60 | 4320 | < th | dose dependent | no | NA | NA |
| 767 | 317.91 | humidity | 50 | 30 | > th | dose dependent | rect. | 9 | 15 |
| 801 | 318.02 | humidity | 80 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 803 | 318.03 | humidity | 70 | 720 | > th | dose independent | sin | 10 | NA |
| 819 | 318.17 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 7 |
| 824 | 318.22 | humidity | 60 | 4320 | < th | dose dependent | rect. | 12 | 7 |
| 913 | 318.55 | humidity | 50 | 4320 | < th | dose independent | rect. | 9 | 8 |
| 939 | 318.59 | wind | 9 | 90 | < th | dose independent | rect. | 23 | 23 |