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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0154800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to DNA-binding factor of bZIP class (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.11 (0.0365) R2 : 0.289
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.98 (0.146) R2dE : 0.299 R2E : 0.272
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.219 (0.0779) R2dN8 : 0.0166 R2N8 : -0.0102
σ : 0.683
deviance : 215.23
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C
peak time of C : --
E
wheather : temperature
threshold : 29.17
memory length : 601
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 6.73
open length of G : 2.22

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
192.26 0.651 3.1 -0.033 0.681 1.81 -0.047 -2.9 0.16 14.3 23 268 6.89 2.07
198.27 0.656 3.12 -0.124 0.638 2.58 -0.536 -- 0.141 14.3 22.51 363 6.95 1.7
192.26 0.646 3.1 -0.0296 0.68 1.79 -- -2.96 0.163 14.3 23.09 267 6.9 2.08
199.17 0.657 3.12 -0.147 0.643 2.78 -- -- 0.144 14.3 22.52 354 7.06 1.83
206.57 0.669 3.07 0.000875 -- 1.82 -- -2.51 0.278 -- 28 526 6.46 1.89
238.83 0.725 3.15 -0.423 0.899 -- -1.3 -- -0.00788 13.2 -- -- -- --
245.64 0.734 3.15 -0.467 0.904 -- -- -- -0.014 13.4 -- -- -- --
214.35 0.682 3.11 -0.192 -- 1.91 -- -- 0.187 -- 29.37 607 6.65 2.23
199.66 0.658 3.12 -- 0.632 2.84 -- -- 0.16 14.3 22.54 361 7.07 1.83
295.93 0.804 3.16 -0.503 -- -- -- -- -0.0332 -- -- -- -- --
251.4 0.742 3.14 -- 0.913 -- -- -- 0.038 13.4 -- -- -- --
215.23 0.683 3.11 -- -- 1.98 -- -- 0.219 -- 29.17 601 6.73 2.22
302.61 0.812 3.15 -- -- -- -- -- 0.0227 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 195.12 temperature 25 270 < th dose dependent rect. 7 3
2 195.36 temperature 25 270 < th dose dependent rect. 6 5
10 198.27 temperature 20 720 < th dose independent rect. 24 10
16 198.79 temperature 25 720 < th dose dependent rect. 23 12
49 200.03 temperature 20 720 < th dose dependent rect. 23 7
56 200.12 temperature 20 270 < th dose independent rect. 6 4
57 200.12 temperature 20 720 < th dose dependent rect. 24 5
60 200.16 temperature 25 720 < th dose dependent sin 7 NA
68 200.21 temperature 20 720 < th dose dependent rect. 1 1
86 200.48 temperature 20 720 < th dose dependent rect. 24 3
93 200.58 temperature 20 720 > th dose independent rect. 1 9
100 200.69 temperature 20 720 < th dose independent sin 7 NA
110 200.81 temperature 20 720 > th dose independent rect. 23 11
191 201.98 temperature 20 270 < th dose independent rect. 5 6
207 202.13 temperature 15 720 > th dose dependent rect. 23 11
217 202.25 temperature 20 720 > th dose independent sin 7 NA
244 202.69 temperature 15 720 > th dose dependent rect. 1 9
336 203.66 temperature 15 720 > th dose dependent sin 7 NA
353 203.84 temperature 20 270 < th dose independent rect. 7 1
636 206.13 temperature 15 270 > th dose dependent rect. 3 16
737 206.88 temperature 20 720 < th dose independent rect. 1 2
835 207.60 temperature 20 270 > th dose independent rect. 3 16