Os11g0153900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribonuclease HII/HIII family protein.
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Os11g0153900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribonuclease HII/HIII family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.82 | 0.36 | 10.7 | 0.00148 | 0.4 | 0.69 | 0.278 | 0.718 | -0.0475 | 17.1 | 24.1 | 10 | -- | -- |
| 59.1 | 0.358 | 10.7 | -0.0798 | 0.384 | 0.742 | 0.36 | -- | -0.0699 | 17 | 24.1 | 13 | -- | -- |
| 58.99 | 0.358 | 10.7 | 0.022 | 0.4 | 0.688 | -- | 0.911 | -0.039 | 17.2 | 24.1 | 10 | -- | -- |
| 59.43 | 0.359 | 10.7 | -0.103 | 0.386 | 0.771 | -- | -- | -0.0799 | 17.3 | 24.1 | 13 | -- | -- |
| 65.12 | 0.376 | 10.7 | -0.0994 | -- | 0.987 | -- | 0.532 | -0.1 | -- | 24.1 | 20 | -- | -- |
| 67.32 | 0.385 | 10.7 | 0.024 | 0.658 | -- | 0.722 | -- | 0.0122 | 16.2 | -- | -- | -- | -- |
| 68.78 | 0.388 | 10.7 | 0.0315 | 0.664 | -- | -- | -- | 0.0162 | 16.3 | -- | -- | -- | -- |
| 64.77 | 0.375 | 10.7 | -0.156 | -- | 1.02 | -- | -- | -0.113 | -- | 24.1 | 84 | -- | -- |
| 59.67 | 0.36 | 10.7 | -- | 0.395 | 0.751 | -- | -- | -0.065 | 17.3 | 24.1 | 13 | -- | -- |
| 92.56 | 0.45 | 10.7 | 0.005 | -- | -- | -- | -- | -0.00147 | -- | -- | -- | -- | -- |
| 68.8 | 0.388 | 10.7 | -- | 0.663 | -- | -- | -- | 0.0127 | 16.3 | -- | -- | -- | -- |
| 65.41 | 0.377 | 10.7 | -- | -- | 0.998 | -- | -- | -0.0911 | -- | 24.16 | 84 | -- | -- |
| 92.56 | 0.449 | 10.7 | -- | -- | -- | -- | -- | -0.00203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 17 |
| 3 | 53.97 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 17 | 54.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 19 | 54.71 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 23 | 54.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 16 |
| 46 | 55.29 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 51 | 55.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 91 | 55.91 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 18 |
| 98 | 55.96 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 20 |
| 103 | 56.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 108 | 56.05 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 118 | 56.14 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 18 |
| 136 | 56.27 | temperature | 20 | 10 | > th | dose dependent | sin | 0 | NA |
| 154 | 56.39 | temperature | 25 | 90 | > th | dose dependent | sin | 4 | NA |
| 167 | 56.47 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 259 | 56.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 279 | 56.95 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 12 |
| 297 | 57.02 | temperature | 25 | 90 | > th | dose dependent | rect. | 24 | 15 |
| 316 | 57.07 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 361 | 57.20 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 640 | 57.91 | temperature | 10 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 698 | 58.03 | temperature | 25 | 10 | < th | dose independent | rect. | 5 | 16 |
| 758 | 58.14 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 884 | 58.49 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 4 |
| 888 | 58.49 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 22 |
| 905 | 58.52 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 909 | 58.56 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 6 |
| 946 | 58.63 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 9 |