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Os11g0153500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0297) R2 : 0.641
β1 : -1.4 (0.112) R2dD : 0.144 R2D : 0.132
β2 : 1.54 (0.0774) R2dC : 0.307 R2C : 0.32
β3 : -0.815 (0.0887) R2dE : 0.0695 R2E : 0.108
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.556 (0.0635) R2dN8 : 0.0948 R2N8 : 0.0427
σ : 0.555
deviance : 142.18
__
_____
C
peak time of C : 17.2
E
wheather : temperature
threshold : 26.31
memory length : 2586
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
133.91 0.544 11.1 -0.735 1.54 -1.22 1.24 3.19 -0.39 17.5 25.41 1103 -- --
141.44 0.554 11.2 -1.21 1.4 -0.795 1.36 -- -0.553 17.2 26.12 2585 -- --
137.36 0.546 11.1 -0.764 1.54 -1.2 -- 3.18 -0.433 17.4 26.05 1129 -- --
142.18 0.555 11.2 -1.4 1.54 -0.815 -- -- -0.556 17.2 26.31 2586 -- --
252.11 0.74 11 -0.616 -- -1.36 -- 3.05 -0.312 -- 24.49 1244 -- --
162.61 0.598 11.2 -1.72 1.56 -- 1.14 -- -0.638 17 -- -- -- --
165.87 0.603 11.2 -1.72 1.57 -- -- -- -0.632 16.9 -- -- -- --
258.93 0.749 11.1 -1.42 -- -0.967 -- -- -0.531 -- 23.81 2694 -- --
158.73 0.587 11 -- 1.55 -1.5 -- -- 0.0638 16.9 14.01 47520 -- --
295.23 0.803 11.2 -1.77 -- -- -- -- -0.673 -- -- -- -- --
243.55 0.73 11.1 -- 1.6 -- -- -- -0.441 16.9 -- -- -- --
284.49 0.786 11 -- -- -1.53 -- -- -0.00324 -- 13.6 47520 -- --
378.28 0.908 11.1 -- -- -- -- -- -0.476 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 125.79 humidity 50.0 30 > th dose dependent rect. 19 8
7 126.87 humidity 90.0 720 < th dose dependent rect. 17 4
10 127.33 temperature 25.0 270 < th dose independent rect. 2 1
11 127.47 temperature 25.0 270 < th dose independent rect. 1 3
14 127.56 precipitation 0.1 90 < th dose independent rect. 2 17
15 127.56 precipitation 0.1 90 < th dose dependent rect. 2 17
28 128.42 temperature 25.0 720 > th dose dependent rect. 17 4
30 128.52 temperature 25.0 720 > th dose dependent rect. 17 6
35 128.69 humidity 80.0 720 < th dose independent rect. 17 4
43 129.24 radiation 10.0 90 < th dose dependent rect. 2 17
46 129.36 temperature 25.0 720 > th dose dependent rect. 18 1
50 129.47 radiation 40.0 270 < th dose independent rect. 13 16
63 130.09 precipitation 0.1 270 < th dose independent rect. 14 15
64 130.09 precipitation 0.1 270 < th dose dependent rect. 14 15
79 130.42 wind 5.0 10 < th dose dependent rect. 3 3
83 130.57 wind 7.0 270 < th dose dependent rect. 1 3
85 130.60 humidity 70.0 720 > th dose independent rect. 18 8
89 130.70 precipitation 0.1 270 < th dose independent rect. 2 2
91 130.70 precipitation 0.1 270 < th dose dependent rect. 2 2
96 130.78 wind 3.0 270 < th dose independent rect. 2 2
97 130.78 temperature 10.0 90 > th dose independent rect. 19 7
98 130.78 temperature 30.0 90 < th dose independent rect. 19 7
99 130.78 humidity 50.0 90 > th dose independent rect. 19 7
101 130.78 atmosphere 995.0 90 > th dose independent rect. 19 7
102 130.78 radiation 1.0 90 < th dose independent rect. 19 7
107 130.78 temperature 10.0 90 > th dose independent rect. 2 17
108 130.78 atmosphere 1015.0 90 < th dose independent rect. 2 17
109 130.78 radiation 1.0 90 < th dose dependent rect. 19 7
114 130.79 wind 9.0 90 < th dose independent rect. 19 7
120 130.90 precipitation 0.1 10 < th dose independent rect. 3 3
121 130.90 precipitation 0.1 10 < th dose dependent rect. 3 3
123 130.94 wind 9.0 270 < th dose independent rect. 4 22
203 131.40 wind 9.0 90 < th dose dependent rect. 19 7
208 131.46 wind 9.0 90 < th dose independent rect. 6 20
232 131.69 radiation 1.0 720 < th dose dependent rect. 14 11
234 131.71 temperature 25.0 720 > th dose dependent rect. 17 15
247 131.90 atmosphere 995.0 30 > th dose independent rect. 3 16
291 132.02 radiation 1.0 270 < th dose independent rect. 5 20
313 132.29 wind 9.0 90 < th dose independent rect. 2 17
318 132.32 temperature 10.0 270 > th dose independent rect. 1 3
321 132.32 humidity 50.0 270 > th dose independent rect. 1 3
324 132.32 atmosphere 995.0 270 > th dose independent rect. 1 3
325 132.32 atmosphere 1010.0 270 < th dose independent rect. 1 3
327 132.32 radiation 1.0 270 < th dose independent rect. 1 3
332 132.32 temperature 10.0 270 > th dose independent rect. 4 21
333 132.32 radiation 1.0 270 < th dose dependent rect. 1 3
340 132.34 wind 9.0 10 < th dose independent rect. 6 21
343 132.35 radiation 1.0 270 < th dose dependent rect. 5 20
344 132.36 radiation 20.0 90 < th dose dependent rect. 2 5
392 132.56 wind 5.0 10 < th dose independent rect. 3 3
395 132.60 humidity 80.0 720 > th dose independent rect. 17 5
396 132.60 radiation 1.0 720 < th dose dependent rect. 8 17
410 132.61 temperature 10.0 90 > th dose independent rect. 6 20
411 132.61 humidity 50.0 270 > th dose dependent rect. 1 3
421 132.67 radiation 1.0 720 < th dose independent rect. 17 8
430 132.71 humidity 70.0 720 > th dose dependent rect. 19 2
451 132.83 radiation 40.0 1440 < th dose dependent rect. 18 9
453 132.85 wind 5.0 270 < th dose independent rect. 24 5
467 132.94 wind 9.0 30 < th dose dependent rect. 3 16
470 132.96 radiation 10.0 90 < th dose independent rect. 2 17
477 133.01 precipitation 0.1 90 < th dose independent rect. 19 7
479 133.01 precipitation 0.1 90 < th dose dependent rect. 19 7
510 133.08 wind 1.0 270 > th dose independent rect. 1 3
543 133.22 temperature 30.0 720 < th dose independent rect. 17 9
576 133.31 temperature 10.0 1440 > th dose independent rect. 20 7
579 133.31 temperature 30.0 1440 < th dose independent rect. 20 7
583 133.31 humidity 50.0 1440 > th dose independent rect. 20 7
589 133.31 atmosphere 995.0 1440 > th dose independent rect. 20 7
590 133.31 radiation 1.0 1440 < th dose independent rect. 20 7
610 133.31 temperature 10.0 1440 > th dose independent rect. 3 17
613 133.31 radiation 40.0 1440 < th dose dependent rect. 20 7
614 133.32 radiation 20.0 1440 < th dose dependent rect. 20 7
657 133.41 temperature 15.0 10 > th dose independent rect. 6 21
662 133.45 humidity 60.0 14400 > th dose independent rect. 3 4
682 133.52 temperature 10.0 10 > th dose independent rect. 3 3
685 133.52 humidity 50.0 10 > th dose independent rect. 3 3
688 133.52 atmosphere 995.0 10 > th dose independent rect. 3 3
689 133.52 atmosphere 1010.0 10 < th dose independent rect. 3 3
691 133.52 radiation 20.0 10 < th dose independent rect. 3 3
702 133.57 temperature 10.0 90 > th dose dependent rect. 2 4
705 133.59 temperature 10.0 270 > th dose dependent rect. 2 2
708 133.61 humidity 50.0 10 > th dose dependent rect. 3 4
720 133.67 radiation 1.0 720 > th dose independent rect. 17 2
741 133.71 radiation 10.0 90 < th dose dependent rect. 2 7
762 133.79 radiation 1.0 270 < th dose independent rect. 7 17
839 133.97 wind 9.0 270 < th dose independent rect. 5 9
874 134.02 precipitation 0.1 270 < th dose independent rect. 1 15
875 134.02 precipitation 0.1 270 < th dose dependent rect. 1 15
880 134.03 humidity 70.0 720 < th dose independent rect. 19 12
882 134.03 radiation 10.0 90 < th dose dependent rect. 2 11
894 134.07 temperature 10.0 10 > th dose dependent rect. 3 3
897 134.07 radiation 30.0 270 < th dose dependent rect. 16 9
939 134.18 precipitation 0.1 270 < th dose independent rect. 24 18
940 134.18 precipitation 0.1 270 < th dose dependent rect. 24 18
962 134.23 radiation 20.0 14400 < th dose independent rect. 3 3