Os11g0153300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0153300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.41 | 0.405 | 11.8 | 0.821 | 1.06 | 0.825 | -1.29 | -0.235 | 0.0221 | 21.4 | 20.4 | 527 | -- | -- |
| 74.56 | 0.402 | 11.8 | 0.866 | 1.05 | 0.842 | -1.36 | -- | 0.0309 | 21.4 | 20.5 | 512 | -- | -- |
| 79.94 | 0.416 | 11.8 | 0.819 | 1.04 | 0.752 | -- | -0.497 | 0.0479 | 21.3 | 20.6 | 587 | -- | -- |
| 81.15 | 0.42 | 11.8 | 0.916 | 1.05 | 0.837 | -- | -- | 0.0323 | 21.3 | 20.51 | 556 | -- | -- |
| 137.87 | 0.547 | 11.8 | 0.673 | -- | 1.06 | -- | -0.498 | -0.111 | -- | 21.3 | 678 | -- | -- |
| 96.17 | 0.46 | 11.7 | 1.16 | 1.16 | -- | -1.32 | -- | 0.212 | 21.2 | -- | -- | -- | -- |
| 102.38 | 0.474 | 11.7 | 1.21 | 1.16 | -- | -- | -- | 0.213 | 21.2 | -- | -- | -- | -- |
| 139.2 | 0.549 | 11.8 | 0.807 | -- | 1.08 | -- | -- | -0.106 | -- | 21.3 | 691 | -- | -- |
| 90.98 | 0.444 | 11.8 | -- | 1.14 | 1.21 | -- | -- | -0.232 | 21.2 | 20.42 | 13731 | -- | -- |
| 180.64 | 0.628 | 11.7 | 1.21 | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
| 140.71 | 0.555 | 11.8 | -- | 1.16 | -- | -- | -- | 0.0791 | 21.3 | -- | -- | -- | -- |
| 155.05 | 0.58 | 11.8 | -- | -- | 1.28 | -- | -- | -0.208 | -- | 21 | 699 | -- | -- |
| 219.27 | 0.691 | 11.7 | -- | -- | -- | -- | -- | 0.0737 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 11 |
| 11 | 69.10 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 19 | 69.66 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 21 | 69.73 | temperature | 15 | 10 | > th | dose dependent | sin | 6 | NA |
| 32 | 69.95 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 6 |
| 42 | 70.17 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 48 | 70.34 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 93 | 71.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 16 |
| 107 | 71.58 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 9 |
| 116 | 71.71 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 11 |
| 133 | 71.92 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 135 | 71.93 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 136 | 71.95 | temperature | 30 | 30 | < th | dose dependent | rect. | 20 | 19 |
| 151 | 72.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 153 | 72.10 | temperature | 20 | 720 | < th | dose independent | rect. | 20 | 15 |
| 156 | 72.11 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 158 | 72.14 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 191 | 72.37 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 8 |
| 195 | 72.40 | temperature | 20 | 720 | < th | dose independent | sin | 10 | NA |
| 198 | 72.41 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 8 |
| 204 | 72.44 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 21 |
| 225 | 72.58 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 19 |
| 243 | 72.68 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 5 |
| 290 | 72.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 449 | 73.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 561 | 74.19 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 2 |
| 675 | 74.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 1 |
| 709 | 74.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 10 |
| 792 | 75.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 901 | 75.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 910 | 75.63 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 15 |
| 950 | 75.73 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 986 | 75.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 15 |