Os11g0151700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Purple acid phosphatase.
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Os11g0151700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Purple acid phosphatase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.82 | 0.465 | 12.1 | -0.728 | 1.15 | 1.04 | 1.25 | -0.187 | -0.501 | 7.95 | 81.72 | 1217 | -- | -- |
| 97.84 | 0.461 | 12.1 | -0.716 | 1.16 | 1.04 | 1.25 | -- | -0.501 | 7.98 | 81.84 | 1196 | -- | -- |
| 102.3 | 0.471 | 12.1 | -0.715 | 1.16 | 1.07 | -- | -0.467 | -0.506 | 8.06 | 81.89 | 1194 | -- | -- |
| 102.56 | 0.472 | 12.1 | -0.674 | 1.16 | 1.03 | -- | -- | -0.498 | 8.04 | 82 | 1200 | -- | -- |
| 166.73 | 0.601 | 12.1 | -0.622 | -- | 0.965 | -- | -0.0671 | -0.493 | -- | 84.34 | 1377 | -- | -- |
| 120.72 | 0.515 | 12.1 | -0.544 | 1.11 | -- | 1.32 | -- | -0.527 | 7.3 | -- | -- | -- | -- |
| 125.38 | 0.524 | 12.1 | -0.514 | 1.11 | -- | -- | -- | -0.529 | 7.36 | -- | -- | -- | -- |
| 166.71 | 0.601 | 12.1 | -0.637 | -- | 0.994 | -- | -- | -0.49 | -- | 84.35 | 1382 | -- | -- |
| 113.88 | 0.497 | 12.1 | -- | 1.21 | 0.969 | -- | -- | -0.478 | 8.09 | 86.5 | 1171 | -- | -- |
| 190.93 | 0.646 | 12.1 | -0.496 | -- | -- | -- | -- | -0.511 | -- | -- | -- | -- | -- |
| 132.35 | 0.538 | 12.1 | -- | 1.11 | -- | -- | -- | -0.472 | 7.39 | -- | -- | -- | -- |
| 176.77 | 0.619 | 12.1 | -- | -- | 0.916 | -- | -- | -0.444 | -- | 87.79 | 1385 | -- | -- |
| 197.42 | 0.656 | 12.1 | -- | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.84 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 2 | 93.87 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 3 | 93.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 7 | 94.11 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 14 | 95.33 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 15 | 95.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 21 | 95.47 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 35 | 96.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 42 | 96.31 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 51 | 96.71 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 91 | 97.28 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 95 | 97.35 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 110 | 97.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 111 | 97.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 112 | 97.58 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 113 | 97.59 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 125 | 97.65 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 144 | 97.84 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 19 |
| 145 | 97.85 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 157 | 97.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 158 | 97.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 187 | 98.18 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 201 | 98.27 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 12 |
| 211 | 98.32 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 277 | 98.54 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 290 | 98.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 343 | 98.74 | humidity | 80 | 1440 | < th | dose dependent | sin | 2 | NA |
| 348 | 98.76 | humidity | 50 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 393 | 98.85 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 429 | 98.92 | humidity | 50 | 720 | > th | dose dependent | sin | 20 | NA |
| 441 | 98.96 | radiation | 10 | 1440 | > th | dose independent | sin | 23 | NA |
| 456 | 99.00 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 463 | 99.00 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 540 | 99.20 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 615 | 99.37 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 670 | 99.47 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 680 | 99.51 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 12 |
| 692 | 99.51 | humidity | 50 | 1440 | > th | dose dependent | sin | 23 | NA |
| 701 | 99.53 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 827 | 99.62 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 831 | 99.63 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 908 | 99.69 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 909 | 99.69 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 5 |