Os11g0151600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Schizosaccharomyces pombe (Fragment).
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Os11g0151600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Schizosaccharomyces pombe (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.06 | 0.46 | 6.62 | -1.24 | 0.397 | 0.721 | 0.857 | -1.84 | -0.0482 | 2.51 | 19.8 | 2858 | -- | -- |
| 99.99 | 0.466 | 6.56 | -1.01 | 0.438 | 1.2 | 0.637 | -- | 0.00972 | 2.96 | 18.84 | 3174 | -- | -- |
| 98.5 | 0.462 | 6.61 | -1.25 | 0.417 | 0.724 | -- | -1.78 | -0.0426 | 2.79 | 19.9 | 2936 | -- | -- |
| 100.91 | 0.468 | 6.55 | -1.05 | 0.426 | 1.36 | -- | -- | 0.0171 | 2.8 | 18.46 | 3136 | -- | -- |
| 107.89 | 0.484 | 6.61 | -1.24 | -- | 0.776 | -- | -1.7 | -0.044 | -- | 19.9 | 2753 | -- | -- |
| 122.07 | 0.518 | 6.49 | -0.395 | 0.429 | -- | 0.739 | -- | 0.272 | 2.54 | -- | -- | -- | -- |
| 123.89 | 0.521 | 6.49 | -0.414 | 0.438 | -- | -- | -- | 0.267 | 2.96 | -- | -- | -- | -- |
| 110.58 | 0.49 | 6.55 | -1.02 | -- | 1.35 | -- | -- | 0.0367 | -- | 18.46 | 2784 | -- | -- |
| 118.66 | 0.507 | 6.5 | -- | 0.417 | 0.931 | -- | -- | 0.267 | 2.82 | 18.3 | 1751 | -- | -- |
| 134.91 | 0.543 | 6.49 | -0.396 | -- | -- | -- | -- | 0.279 | -- | -- | -- | -- | -- |
| 128.41 | 0.53 | 6.48 | -- | 0.43 | -- | -- | -- | 0.313 | 2.95 | -- | -- | -- | -- |
| 128.81 | 0.529 | 6.5 | -- | -- | 1.01 | -- | -- | 0.241 | -- | 18.24 | 1690 | -- | -- |
| 139.03 | 0.55 | 6.48 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.47 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 2 | 93.65 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 8 | 95.10 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 23 |
| 9 | 95.10 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 19 | 95.65 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 25 | 95.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 54 | 96.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 71 | 96.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 75 | 96.66 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 10 |
| 77 | 96.66 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 11 |
| 95 | 96.83 | humidity | 90 | 14400 | > th | dose dependent | sin | 2 | NA |
| 96 | 96.85 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 99 | 96.86 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 14 |
| 101 | 96.89 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 113 | 96.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 122 | 96.99 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 134 | 97.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 150 | 97.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 151 | 97.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 158 | 97.10 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 179 | 97.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 182 | 97.17 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 193 | 97.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 12 |
| 234 | 97.25 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 236 | 97.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 243 | 97.27 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 263 | 97.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 20 |
| 325 | 97.45 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 384 | 97.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 22 |
| 433 | 97.62 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 443 | 97.64 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 464 | 97.68 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 479 | 97.70 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 527 | 97.78 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 3 |
| 537 | 97.80 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 3 |
| 562 | 97.85 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 22 |
| 582 | 97.88 | temperature | 25 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 587 | 97.89 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 17 |
| 650 | 97.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 713 | 98.06 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 731 | 98.08 | radiation | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 773 | 98.10 | radiation | 40 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 846 | 98.15 | radiation | 40 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 857 | 98.16 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 3 |
| 868 | 98.17 | radiation | 40 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 878 | 98.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 23 |
| 921 | 98.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 954 | 98.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 976 | 98.28 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |