Os11g0150800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0150800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.25 | 0.32 | 9.07 | -0.78 | 0.368 | -0.593 | 0.397 | -1.1 | -0.277 | 9.1 | 22.5 | 2117 | -- | -- |
| 49.74 | 0.328 | 9.09 | -1.12 | 0.355 | -0.769 | 0.324 | -- | -0.317 | 8.94 | 24.7 | 2971 | -- | -- |
| 46.64 | 0.318 | 9.08 | -0.781 | 0.351 | -0.58 | -- | -1.04 | -0.275 | 8.58 | 22.5 | 1898 | -- | -- |
| 49.41 | 0.327 | 9.11 | -1.18 | 0.318 | -0.743 | -- | -- | -0.356 | 9.44 | 24.77 | 2876 | -- | -- |
| 52.89 | 0.339 | 9.08 | -0.762 | -- | -0.582 | -- | -1.07 | -0.262 | -- | 22.3 | 1612 | -- | -- |
| 62.84 | 0.372 | 9.06 | -0.931 | 0.329 | -- | 0.224 | -- | -0.154 | 8.7 | -- | -- | -- | -- |
| 62.98 | 0.372 | 9.06 | -0.925 | 0.332 | -- | -- | -- | -0.154 | 8.45 | -- | -- | -- | -- |
| 55.47 | 0.347 | 9.11 | -1.2 | -- | -0.739 | -- | -- | -0.349 | -- | 24.7 | 2933 | -- | -- |
| 81.26 | 0.42 | 9.07 | -- | 0.347 | -0.351 | -- | -- | -0.161 | 9.1 | 24.9 | 1250 | -- | -- |
| 69.12 | 0.388 | 9.07 | -0.923 | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
| 85.53 | 0.433 | 9.04 | -- | 0.328 | -- | -- | -- | -0.051 | 8.66 | -- | -- | -- | -- |
| 86.8 | 0.434 | 9.07 | -- | -- | -0.329 | -- | -- | -0.155 | -- | 22.63 | 1495 | -- | -- |
| 91.61 | 0.447 | 9.05 | -- | -- | -- | -- | -- | -0.0483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.52 | temperature | 10 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 2 | 45.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 8 | 46.18 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 17 | 46.56 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 22 | 46.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 25 | 46.70 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 27 | 46.72 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 41 | 46.84 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 61 | 46.92 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 22 |
| 65 | 46.97 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 4 |
| 90 | 47.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 8 |
| 94 | 47.11 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 127 | 47.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 169 | 47.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 218 | 47.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 241 | 47.50 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 263 | 47.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 264 | 47.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 342 | 47.69 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 386 | 47.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 458 | 47.89 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 481 | 47.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 489 | 47.94 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 497 | 47.95 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 14 |
| 505 | 47.96 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 528 | 47.99 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 537 | 48.00 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 542 | 48.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 586 | 48.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 640 | 48.10 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 643 | 48.10 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 645 | 48.10 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 693 | 48.16 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 745 | 48.20 | temperature | 25 | 1440 | < th | dose independent | sin | 15 | NA |
| 747 | 48.20 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 994 | 48.39 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |