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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0150700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.12 (0.0508) R2 : 0.71
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.47 (0.146) R2dC : 0.49 R2C : -0.22
β3 : 4.01 (0.123) R2dE : 0.922 R2E : 0.215
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.204 (0.107) R2dN8 : 0.00327 R2N8 : 0.00747
σ : 0.954
deviance : 419.81
__
_____
C
peak time of C : 2.25
E
wheather : wind
threshold : 0.8005
memory length : 229
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.18
open length of G : 9.65

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
401.4 0.941 6.12 -0.248 3.31 3.72 -0.547 1.91 0.23 2.87 1.098 268 2.95 9.44
408.81 0.942 6.15 -0.184 3.43 3.98 -1.97 -- 0.197 2.29 0.8007 245 3.06 9.67
402.03 0.934 6.12 -0.242 3.32 3.75 -- 2.15 0.23 2.84 1.059 267 2.95 9.49
420.23 0.955 6.13 -0.178 3.39 3.95 -- -- 0.195 2.28 0.8722 236 3.07 9.73
660.29 1.2 6.07 -0.163 -- 2.94 -- 1.64 0.405 -- -2.19 200 0.417 11.3
535.86 1.09 5.98 -0.418 4.11 -- 0.941 -- 0.323 7.05 -- -- -- --
538.11 1.09 5.98 -0.401 4.11 -- -- -- 0.32 7.02 -- -- -- --
622.42 1.16 6.13 -0.21 -- 3.39 -- -- 0.224 -- 0.8272 308 0.0608 10.2
419.81 0.954 6.12 -- 3.47 4.01 -- -- 0.204 2.25 0.8005 229 3.18 9.65
1428.43 1.77 6.07 -0.318 -- -- -- -- 0.395 -- -- -- -- --
542.34 1.09 5.97 -- 4.11 -- -- -- 0.364 7.03 -- -- -- --
621.5 1.16 6.11 -- -- 3.46 -- -- 0.246 -- 0.8435 289 0.0128 10.3
1431.1 1.77 6.07 -- -- -- -- -- 0.43 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 406.30 wind 1.0 270 > th dose independent rect. 3 9
3 420.94 temperature 20.0 10 > th dose independent rect. 14 16
9 430.69 temperature 10.0 10 > th dose dependent rect. 14 16
10 431.00 wind 1.0 270 > th dose independent rect. 17 18
13 432.77 temperature 10.0 270 > th dose dependent rect. 22 10
14 432.90 precipitation 0.1 270 < th dose independent rect. 3 10
15 432.90 precipitation 0.1 270 < th dose dependent rect. 3 10
18 433.29 temperature 20.0 270 > th dose independent rect. 12 15
22 434.72 precipitation 0.1 10 < th dose independent rect. 6 8
23 434.72 precipitation 0.1 10 < th dose dependent rect. 6 8
24 435.03 temperature 10.0 10 > th dose independent rect. 6 8
26 435.03 atmosphere 995.0 10 > th dose independent rect. 6 8
27 435.03 atmosphere 1015.0 10 < th dose independent rect. 6 8
28 435.03 temperature 10.0 10 > th dose independent rect. 14 16
29 435.17 atmosphere 1015.0 10 < th dose independent rect. 14 16
33 436.12 wind 9.0 10 < th dose independent rect. 14 16
35 436.13 temperature 10.0 270 > th dose independent rect. 3 10
36 436.13 atmosphere 995.0 270 > th dose independent rect. 3 10
37 436.13 atmosphere 1015.0 270 < th dose independent rect. 3 10
38 436.13 temperature 10.0 270 > th dose independent rect. 13 14
43 436.78 wind 9.0 10 < th dose independent rect. 6 8
49 436.87 radiation 40.0 10 < th dose independent rect. 14 16
50 437.66 radiation 1.0 10 > th dose independent rect. 6 8
51 437.89 wind 9.0 270 < th dose independent rect. 3 10
54 437.99 wind 9.0 270 < th dose independent rect. 13 14
58 438.15 humidity 90.0 10 < th dose independent rect. 5 9
65 438.41 wind 1.0 30 > th dose independent rect. 19 19
73 439.37 wind 1.0 270 > th dose independent rect. 16 21
81 440.27 temperature 10.0 1440 > th dose independent rect. 7 8
84 440.27 temperature 10.0 1440 > th dose independent rect. 15 16
95 441.52 temperature 20.0 10 > th dose independent rect. 24 6
96 441.54 humidity 90.0 10 < th dose independent rect. 3 11
98 441.70 atmosphere 1015.0 270 < th dose independent rect. 12 15
103 442.02 humidity 90.0 30 < th dose independent rect. 19 12
104 442.12 humidity 90.0 10 < th dose independent rect. 19 19
108 442.95 atmosphere 1015.0 270 < th dose independent rect. 23 18
109 443.02 radiation 1.0 90 > th dose independent rect. 4 10
120 443.26 humidity 50.0 270 > th dose independent rect. 3 9
141 444.33 precipitation 0.1 270 < th dose independent rect. 17 6
142 444.33 precipitation 0.1 270 < th dose dependent rect. 17 6
154 444.98 temperature 20.0 270 > th dose independent rect. 11 6
155 445.14 temperature 15.0 270 > th dose independent rect. 17 6
156 445.52 humidity 50.0 10 > th dose independent rect. 14 16
159 445.64 radiation 40.0 270 < th dose dependent rect. 16 7
160 445.67 precipitation 0.1 10 < th dose independent rect. 14 16
161 445.67 precipitation 0.1 10 < th dose dependent rect. 14 16
164 445.95 temperature 20.0 90 > th dose independent rect. 24 18
169 446.30 temperature 20.0 270 > th dose independent rect. 22 8
171 446.32 wind 9.0 270 < th dose independent rect. 17 6
175 446.42 radiation 20.0 270 < th dose independent rect. 17 6
178 446.42 temperature 10.0 270 > th dose independent rect. 23 18
182 446.68 wind 9.0 270 < th dose independent rect. 23 18
186 446.84 precipitation 0.1 270 < th dose independent rect. 12 15
187 446.84 precipitation 0.1 270 < th dose dependent rect. 12 15
190 446.94 temperature 30.0 270 < th dose independent rect. 3 9
211 447.48 precipitation 0.1 270 < th dose independent rect. 17 18
212 447.48 precipitation 0.1 270 < th dose dependent rect. 17 18
217 447.72 temperature 10.0 270 > th dose dependent rect. 23 18
219 447.80 atmosphere 995.0 10 > th dose independent rect. 14 16
227 448.22 wind 1.0 270 > th dose independent rect. 12 15
231 448.52 atmosphere 995.0 270 > th dose independent rect. 17 6
232 448.55 humidity 50.0 270 > th dose independent rect. 17 6
266 449.38 precipitation 0.1 270 < th dose independent rect. 23 18
267 449.38 precipitation 0.1 270 < th dose dependent rect. 23 18
272 449.53 wind 1.0 270 > th dose independent rect. 11 6
274 449.57 wind 1.0 270 > th dose independent rect. 17 6
290 449.81 humidity 50.0 270 > th dose independent rect. 23 18
302 450.02 wind 1.0 270 > th dose independent rect. 16 8
323 450.50 humidity 50.0 270 > th dose independent rect. 24 16
331 450.79 temperature 20.0 270 > th dose independent rect. 13 3
338 450.99 atmosphere 995.0 270 > th dose independent rect. 23 18
357 451.52 temperature 15.0 10 > th dose dependent rect. 24 6
359 451.65 wind 9.0 270 < th dose independent rect. 17 18
364 451.80 radiation 1.0 90 < th dose dependent rect. 16 9
367 451.87 radiation 1.0 270 > th dose independent rect. 11 6
373 451.96 temperature 10.0 270 > th dose independent rect. 11 6
374 451.96 atmosphere 1015.0 270 < th dose independent rect. 11 6
377 451.96 temperature 10.0 270 > th dose independent rect. 17 18
381 452.04 precipitation 0.1 270 < th dose independent rect. 11 6
382 452.04 precipitation 0.1 270 < th dose dependent rect. 11 6
388 452.11 wind 9.0 270 < th dose independent rect. 11 6
415 452.76 temperature 10.0 270 > th dose dependent rect. 11 6
456 453.65 humidity 80.0 10 > th dose dependent rect. 24 6
466 453.81 humidity 50.0 270 > th dose independent rect. 17 18
468 453.83 humidity 90.0 10 < th dose independent sin 8 NA
471 453.90 atmosphere 995.0 270 > th dose independent rect. 17 18
473 453.95 atmosphere 995.0 270 > th dose independent rect. 12 15
491 454.26 wind 9.0 270 < th dose dependent rect. 16 7
495 454.29 temperature 30.0 270 < th dose independent rect. 18 17
498 454.35 temperature 20.0 10 > th dose independent rect. 14 5
506 454.56 wind 9.0 30 < th dose dependent rect. 6 8
518 454.86 atmosphere 995.0 10 > th dose dependent rect. 6 8
552 455.47 temperature 30.0 30 < th dose independent rect. 6 8
560 455.52 humidity 90.0 30 > th dose independent rect. 24 6
575 455.72 wind 1.0 30 > th dose independent rect. 19 12
588 455.81 radiation 40.0 270 < th dose independent rect. 17 18
596 455.85 radiation 1.0 90 < th dose dependent rect. 13 12
603 455.97 radiation 1.0 90 < th dose dependent rect. 8 17
625 456.18 precipitation 0.1 270 < th dose independent rect. 16 21
627 456.18 precipitation 0.1 270 < th dose dependent rect. 16 21
646 456.29 radiation 40.0 10 < th dose dependent rect. 14 16
688 456.80 atmosphere 995.0 270 > th dose independent rect. 11 6
699 457.02 temperature 20.0 270 > th dose independent rect. 14 1
707 457.10 humidity 50.0 270 > th dose dependent rect. 22 8
715 457.27 temperature 20.0 270 > th dose independent rect. 1 1
742 457.59 radiation 1.0 90 < th dose independent rect. 13 12
746 457.69 radiation 1.0 90 < th dose independent rect. 8 17
775 458.01 wind 9.0 10 < th dose independent rect. 24 19
787 458.12 atmosphere 1015.0 10 < th dose independent rect. 24 19
823 458.32 wind 7.0 10 < th dose independent rect. 19 5
839 458.41 precipitation 0.1 270 < th dose independent rect. 6 16
842 458.41 precipitation 0.1 270 < th dose dependent rect. 6 16
862 458.52 humidity 50.0 10 > th dose independent rect. 6 8
873 458.62 atmosphere 1015.0 270 < th dose independent rect. 22 8
884 458.74 wind 1.0 270 > th dose independent rect. 13 3
899 458.84 humidity 50.0 270 > th dose independent rect. 11 6
914 458.93 precipitation 0.1 10 < th dose independent rect. 19 5
915 458.93 precipitation 0.1 10 < th dose dependent rect. 19 5
925 458.98 atmosphere 995.0 1440 > th dose independent rect. 7 7
942 459.08 wind 1.0 30 > th dose independent rect. 19 5
948 459.12 wind 1.0 270 > th dose independent rect. 3 21
951 459.14 temperature 30.0 10 < th dose independent rect. 19 5
952 459.14 humidity 50.0 10 > th dose independent rect. 19 5
954 459.14 atmosphere 995.0 10 > th dose independent rect. 19 5
955 459.14 radiation 1.0 10 < th dose independent rect. 19 5
962 459.14 temperature 10.0 10 > th dose independent rect. 24 19
963 459.14 radiation 1.0 10 < th dose dependent rect. 19 5
971 459.19 humidity 90.0 270 < th dose independent rect. 11 6