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Os11g0148200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.87 (0.0244) R2 : 0.691
β1 : -1.03 (0.0898) R2dD : 0.095 R2D : 0.00302
β2 : 0.734 (0.0579) R2dC : 0.109 R2C : 0.115
β3 : 2.34 (0.0875) R2dE : 0.501 R2E : 0.419
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.55 (0.0523) R2dN8 : 0.102 R2N8 : 0.00516
σ : 0.455
deviance : 95.28
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C
peak time of C : 11.3
E
wheather : temperature
threshold : 0.4141
memory length : 317
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.74
open length of G : 21.8

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
91.26 0.449 6.85 -0.819 0.724 2.16 -1.04 1.73 -0.505 12.2 5.598 278 4.33 21.8
91.85 0.446 6.86 -1.04 0.73 2.31 -0.899 -- -0.527 11.3 0.8301 316 3.86 21.8
95.83 0.456 6.86 -0.812 0.737 2.19 -- 1.78 -0.491 11.9 5.117 287 4.25 21.8
95.28 0.455 6.87 -1.03 0.734 2.34 -- -- -0.55 11.3 0.4141 317 3.74 21.8
122.36 0.515 6.89 -0.984 -- 2.49 -- 1.45 -0.604 -- 9.015 200 4.27 22.2
143.64 0.562 6.85 -0.676 1.59 -- 0.112 -- -0.336 15.4 -- -- -- --
143.68 0.561 6.85 -0.674 1.59 -- -- -- -0.335 15.4 -- -- -- --
122.26 0.515 6.92 -1.11 -- 2.56 -- -- -0.679 -- 7.846 203 4.18 22.2
120.18 0.511 6.84 -- 0.793 1.91 -- -- -0.363 12.4 -12.43 324 3.6 22.1
286.42 0.791 6.85 -0.742 -- -- -- -- -0.378 -- -- -- -- --
155.67 0.584 6.83 -- 1.61 -- -- -- -0.26 15.4 -- -- -- --
151.92 0.574 6.86 -- -- 2.22 -- -- -0.435 -- -10.48 293 3.43 22
300.93 0.81 6.83 -- -- -- -- -- -0.295 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 94.32 temperature 10 270 > th dose dependent rect. 4 22
3 94.62 temperature 15 90 > th dose dependent rect. 7 19
10 96.81 temperature 30 90 < th dose dependent rect. 2 17
16 97.69 temperature 15 10 > th dose dependent rect. 8 18
25 98.67 temperature 30 270 < th dose dependent rect. 23 20
26 98.74 temperature 30 10 < th dose dependent rect. 3 17
58 100.15 temperature 30 90 < th dose dependent rect. 1 22
122 103.85 temperature 20 10 > th dose dependent rect. 7 22
134 104.22 temperature 25 90 < th dose independent rect. 2 19
138 104.34 temperature 30 10 < th dose dependent rect. 12 20
148 104.57 temperature 30 10 < th dose dependent rect. 14 18
188 105.40 temperature 25 270 < th dose independent rect. 24 20
223 106.06 temperature 10 270 > th dose dependent rect. 16 23
255 106.75 temperature 30 90 < th dose dependent rect. 11 22
282 107.25 temperature 30 90 < th dose dependent sin 5 NA
284 107.29 temperature 30 30 < th dose dependent sin 3 NA
312 107.73 temperature 30 90 < th dose dependent rect. 13 22
350 108.31 temperature 30 10 < th dose dependent rect. 24 23
447 109.62 temperature 10 10 > th dose dependent no NA NA
466 109.77 temperature 20 10 > th dose dependent rect. 19 23
495 110.05 temperature 30 90 < th dose dependent rect. 9 23
502 110.11 temperature 30 10 < th dose dependent rect. 9 23
507 110.16 temperature 10 10 > th dose dependent sin 0 NA
563 110.66 temperature 20 10 > th dose dependent rect. 23 23
571 110.80 temperature 20 10 > th dose dependent rect. 17 23
599 111.00 temperature 30 10 < th dose dependent rect. 15 23
601 111.03 temperature 30 10 < th dose dependent no NA NA
712 111.97 temperature 30 10 < th dose dependent rect. 21 23
732 112.22 temperature 25 270 < th dose independent sin 8 NA
736 112.29 temperature 30 270 < th dose independent rect. 14 16
770 112.53 temperature 30 90 < th dose dependent rect. 2 9
782 112.61 temperature 30 10 < th dose dependent rect. 17 23
840 112.98 temperature 25 90 < th dose independent rect. 11 22
846 113.01 temperature 30 270 < th dose dependent rect. 23 10
867 113.16 temperature 20 10 > th dose dependent rect. 21 23
892 113.30 temperature 15 270 > th dose dependent rect. 19 15
964 113.84 temperature 20 10 > th dose dependent rect. 1 23