Os11g0147800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Wali7 protein (Fragment).
FiT-DB / Search/ Help/ Sample detail
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Os11g0147800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Wali7 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74.87 | 0.407 | 15.7 | 0.799 | 1.67 | -1.04 | 0.141 | 0.446 | -0.137 | 11.1 | 25.39 | 465 | -- | -- |
| 75.07 | 0.404 | 15.7 | 0.884 | 1.66 | -1.07 | 0.153 | -- | -0.11 | 11.1 | 24.98 | 447 | -- | -- |
| 74.96 | 0.403 | 15.7 | 0.797 | 1.68 | -1.04 | -- | 0.484 | -0.138 | 11.1 | 25.4 | 467 | -- | -- |
| 75.2 | 0.404 | 15.7 | 0.885 | 1.66 | -1.08 | -- | -- | -0.113 | 11.1 | 24.92 | 447 | -- | -- |
| 179.56 | 0.624 | 15.7 | 0.585 | -- | -2.28 | -- | 0.928 | -0.248 | -- | 52.28 | 2 | -- | -- |
| 92.15 | 0.45 | 15.6 | 1.16 | 1.61 | -- | 0.192 | -- | 0.106 | 11.4 | -- | -- | -- | -- |
| 92.31 | 0.45 | 15.6 | 1.16 | 1.6 | -- | -- | -- | 0.107 | 11.4 | -- | -- | -- | -- |
| 180.29 | 0.625 | 15.7 | 0.713 | -- | -2.26 | -- | -- | -0.212 | -- | 65.79 | 2 | -- | -- |
| 80.23 | 0.417 | 15.7 | -- | 1.71 | -1.24 | -- | -- | -0.175 | 11.2 | 19.45 | 29555 | -- | -- |
| 253.84 | 0.744 | 15.7 | 1.12 | -- | -- | -- | -- | 0.0903 | -- | -- | -- | -- | -- |
| 128.08 | 0.529 | 15.6 | -- | 1.59 | -- | -- | -- | -0.0229 | 11.4 | -- | -- | -- | -- |
| 192.92 | 0.647 | 15.7 | -- | -- | -2.48 | -- | -- | -0.317 | -- | 70.48 | 2 | -- | -- |
| 287.1 | 0.791 | 15.7 | -- | -- | -- | -- | -- | -0.0343 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.49 | temperature | 10 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 2 | 68.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 4 | 69.00 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 21 |
| 5 | 69.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 21 |
| 8 | 69.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 24 | 70.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 29 | 70.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 47 | 71.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 64 | 72.09 | temperature | 10 | 30 | > th | dose dependent | rect. | 4 | 14 |
| 72 | 72.34 | radiation | 40 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 86 | 72.62 | wind | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 91 | 72.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 19 |
| 95 | 72.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 6 |
| 97 | 72.88 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 101 | 72.91 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 4 |
| 114 | 73.01 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 136 | 73.16 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 156 | 73.35 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 13 |
| 159 | 73.39 | radiation | 30 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 162 | 73.43 | radiation | 1 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 196 | 73.71 | temperature | 20 | 30 | > th | dose dependent | rect. | 12 | 19 |
| 204 | 73.77 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 209 | 73.80 | humidity | 90 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 211 | 73.83 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 213 | 73.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 215 | 73.86 | radiation | 30 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 218 | 73.88 | radiation | 10 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 221 | 73.90 | radiation | 10 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 235 | 73.92 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 237 | 73.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 238 | 73.93 | radiation | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 241 | 73.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 12 | 23 |
| 244 | 73.96 | radiation | 10 | 720 | < th | dose independent | rect. | 4 | 3 |
| 248 | 73.97 | radiation | 40 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 255 | 74.01 | radiation | 40 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 263 | 74.04 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 266 | 74.05 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 272 | 74.07 | wind | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 273 | 74.07 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 298 | 74.08 | radiation | 40 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 303 | 74.08 | radiation | 40 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 335 | 74.12 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 339 | 74.12 | radiation | 40 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 340 | 74.13 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 410 | 74.15 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 413 | 74.15 | radiation | 40 | 43200 | > th | dose dependent | sin | 21 | NA |
| 437 | 74.16 | radiation | 40 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 453 | 74.16 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 472 | 74.16 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 475 | 74.17 | radiation | 40 | 43200 | > th | dose dependent | no | NA | NA |
| 600 | 74.18 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 606 | 74.18 | radiation | 1 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 619 | 74.18 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 646 | 74.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 647 | 74.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 695 | 74.25 | radiation | 40 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 751 | 74.27 | radiation | 40 | 43200 | > th | dose independent | sin | 2 | NA |
| 758 | 74.28 | radiation | 40 | 43200 | > th | dose independent | sin | 0 | NA |
| 763 | 74.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 22 |
| 765 | 74.29 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 935 | 74.31 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 941 | 74.32 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 3 |