Os11g0147600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0147600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.61 | 0.427 | 2.89 | -0.0144 | 0.0811 | 0.362 | -0.462 | 0.42 | 0.0554 | 15 | 1004 | 45 | -- | -- |
| 82.88 | 0.424 | 2.88 | -0.00605 | 0.0796 | 0.353 | -0.47 | -- | 0.0563 | 15 | 1004 | 44 | -- | -- |
| 83.27 | 0.425 | 2.89 | -0.0247 | 0.0824 | 0.368 | -- | 0.426 | 0.0515 | 13.6 | 1004 | 38 | -- | -- |
| 83.55 | 0.426 | 2.89 | -0.0143 | 0.0787 | 0.363 | -- | -- | 0.0495 | 13.6 | 1004 | 44 | -- | -- |
| 83.68 | 0.426 | 2.89 | -0.0269 | -- | 0.369 | -- | 0.4 | 0.0498 | -- | 1004 | 44 | -- | -- |
| 84.87 | 0.432 | 2.87 | -0.0117 | 0.0714 | -- | -0.499 | -- | 0.118 | 14.9 | -- | -- | -- | -- |
| 85.59 | 0.433 | 2.87 | -0.0235 | 0.0812 | -- | -- | -- | 0.115 | 12.4 | -- | -- | -- | -- |
| 83.93 | 0.427 | 2.89 | -0.0165 | -- | 0.363 | -- | -- | 0.0482 | -- | 1004 | 64 | -- | -- |
| 83.56 | 0.426 | 2.89 | -- | 0.0789 | 0.365 | -- | -- | 0.0509 | 13.6 | 1004 | 44 | -- | -- |
| 86 | 0.433 | 2.87 | -0.0263 | -- | -- | -- | -- | 0.113 | -- | -- | -- | -- | -- |
| 85.6 | 0.433 | 2.87 | -- | 0.0816 | -- | -- | -- | 0.117 | 12.4 | -- | -- | -- | -- |
| 83.94 | 0.427 | 2.89 | -- | -- | 0.364 | -- | -- | 0.0499 | -- | 1004 | 64 | -- | -- |
| 86.02 | 0.433 | 2.87 | -- | -- | -- | -- | -- | 0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.37 | wind | 7 | 30 | > th | dose independent | rect. | 18 | 3 |
| 2 | 74.38 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 5 | 74.38 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 111 | 78.86 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 119 | 78.96 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 124 | 79.20 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 131 | 79.48 | humidity | 60 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 144 | 79.51 | humidity | 60 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 180 | 79.80 | wind | 5 | 30 | > th | dose dependent | rect. | 18 | 7 |
| 222 | 80.14 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 4 |
| 227 | 80.25 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 253 | 80.25 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 282 | 80.27 | humidity | 80 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 285 | 80.33 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 287 | 80.34 | humidity | 60 | 90 | < th | dose independent | rect. | 16 | 18 |
| 290 | 80.37 | wind | 9 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 292 | 80.39 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 397 | 80.65 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 18 |
| 405 | 80.68 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 473 | 80.68 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 582 | 80.72 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 584 | 80.72 | humidity | 80 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 603 | 80.77 | radiation | 40 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 631 | 80.81 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 2 |
| 705 | 80.88 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 925 | 81.20 | radiation | 20 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 950 | 81.22 | wind | 7 | 90 | > th | dose independent | rect. | 4 | 5 |
| 958 | 81.23 | wind | 7 | 90 | > th | dose independent | rect. | 8 | 1 |
| 974 | 81.23 | wind | 7 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 993 | 81.26 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 19 | 1 |