Os11g0147200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0147200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.49 | 0.64 | 3.57 | 0.0849 | 1.34 | 0.328 | 0.646 | 1.54 | 0.695 | 19.5 | 0.9387 | 1583 | -- | -- |
| 188.8 | 0.64 | 3.59 | 0.00348 | 1.32 | 0.542 | 0.504 | -- | 0.723 | 19.6 | 1 | 1378 | -- | -- |
| 186.63 | 0.636 | 3.57 | 0.0816 | 1.34 | 0.333 | -- | 1.5 | 0.698 | 19.5 | 0.9497 | 1582 | -- | -- |
| 189.17 | 0.641 | 3.6 | -0.00576 | 1.33 | 0.544 | -- | -- | 0.717 | 19.6 | 0.9915 | 1378 | -- | -- |
| 278.31 | 0.777 | 3.56 | -0.00988 | -- | 0.313 | -- | 1.7 | 0.629 | -- | 0.968 | 1310 | -- | -- |
| 194.39 | 0.654 | 3.62 | 0.169 | 1.31 | -- | 0.47 | -- | 0.609 | 19.6 | -- | -- | -- | -- |
| 195.01 | 0.654 | 3.62 | 0.158 | 1.31 | -- | -- | -- | 0.609 | 19.6 | -- | -- | -- | -- |
| 282.68 | 0.783 | 3.57 | 0.00354 | -- | 0.458 | -- | -- | 0.677 | -- | 0.9043 | 1336 | -- | -- |
| 189.17 | 0.641 | 3.6 | -- | 1.33 | 0.544 | -- | -- | 0.718 | 19.6 | 0.9743 | 1378 | -- | -- |
| 286.81 | 0.791 | 3.59 | 0.139 | -- | -- | -- | -- | 0.589 | -- | -- | -- | -- | -- |
| 195.66 | 0.654 | 3.62 | -- | 1.31 | -- | -- | -- | 0.592 | 19.6 | -- | -- | -- | -- |
| 282.67 | 0.783 | 3.57 | -- | -- | 0.462 | -- | -- | 0.678 | -- | 0.9002 | 1328 | -- | -- |
| 287.32 | 0.791 | 3.59 | -- | -- | -- | -- | -- | 0.574 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 183.31 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 6 |
| 2 | 183.40 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 3 | 183.57 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 5 | 183.80 | wind | 5.0 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 6 | 183.83 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 19 |
| 43 | 184.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 44 | 184.12 | wind | 5.0 | 14400 | < th | dose independent | rect. | 8 | 13 |
| 48 | 184.14 | wind | 5.0 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 61 | 184.17 | wind | 5.0 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 63 | 184.18 | wind | 5.0 | 14400 | > th | dose independent | rect. | 23 | 21 |
| 88 | 184.24 | wind | 5.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 104 | 184.27 | wind | 5.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 111 | 184.28 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 144 | 184.38 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 152 | 184.38 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 10 | 10 |
| 205 | 184.48 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 10 |
| 245 | 184.58 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 258 | 184.61 | wind | 5.0 | 14400 | > th | dose independent | no | NA | NA |
| 263 | 184.61 | wind | 5.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 265 | 184.62 | wind | 5.0 | 14400 | < th | dose independent | no | NA | NA |
| 268 | 184.62 | wind | 1.0 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 269 | 184.62 | wind | 1.0 | 1440 | < th | dose independent | rect. | 22 | 20 |
| 273 | 184.62 | wind | 5.0 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 281 | 184.64 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 294 | 184.65 | atmosphere | 1000.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 341 | 184.78 | wind | 5.0 | 14400 | > th | dose independent | rect. | 18 | 23 |
| 342 | 184.78 | wind | 5.0 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 347 | 184.79 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 380 | 184.88 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 416 | 185.00 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 417 | 185.01 | wind | 1.0 | 1440 | > th | dose independent | rect. | 22 | 16 |
| 425 | 185.03 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 476 | 185.20 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 477 | 185.21 | humidity | 70.0 | 30 | < th | dose independent | rect. | 17 | 22 |
| 493 | 185.28 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 494 | 185.28 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 497 | 185.29 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 499 | 185.30 | wind | 1.0 | 1440 | < th | dose independent | rect. | 22 | 8 |
| 507 | 185.31 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 538 | 185.38 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 549 | 185.41 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 551 | 185.42 | wind | 1.0 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 571 | 185.50 | wind | 1.0 | 1440 | > th | dose independent | rect. | 22 | 8 |
| 587 | 185.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 600 | 185.58 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 605 | 185.59 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 8 | 13 |
| 608 | 185.60 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 619 | 185.63 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 623 | 185.65 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 627 | 185.65 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 9 | 18 |
| 628 | 185.66 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 655 | 185.71 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 656 | 185.71 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 658 | 185.71 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 14 |
| 666 | 185.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 8 |
| 667 | 185.73 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 10 |
| 688 | 185.76 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 693 | 185.77 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 701 | 185.79 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 718 | 185.81 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 725 | 185.83 | temperature | 25.0 | 10 | < th | dose independent | rect. | 12 | 8 |
| 764 | 185.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 767 | 185.89 | wind | 5.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 772 | 185.90 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 780 | 185.91 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 804 | 185.95 | wind | 1.0 | 1440 | > th | dose independent | rect. | 22 | 5 |
| 837 | 185.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 845 | 185.99 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 22 |
| 864 | 186.01 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 890 | 186.04 | wind | 5.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 904 | 186.05 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 922 | 186.08 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 22 | 21 |
| 928 | 186.09 | wind | 1.0 | 1440 | < th | dose independent | rect. | 19 | 20 |
| 929 | 186.09 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 933 | 186.10 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 941 | 186.10 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 9 |
| 947 | 186.11 | wind | 5.0 | 90 | > th | dose dependent | rect. | 15 | 5 |
| 952 | 186.12 | wind | 1.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 954 | 186.12 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 955 | 186.12 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 6 |