Os11g0147000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Long chain acyl-CoA synthetase 6 (EC 6.2.1.3).
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Os11g0147000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Long chain acyl-CoA synthetase 6 (EC 6.2.1.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.39 | 0.343 | 11.8 | -1.23 | 1.45 | -0.241 | 0.0737 | -3.24 | 0.359 | 18.1 | 0.1718 | 4698 | -- | -- |
| 54.07 | 0.342 | 11.8 | -0.994 | 1.43 | -0.58 | 0.0999 | -- | 0.465 | 18.1 | 0.8475 | 12424 | -- | -- |
| 53.41 | 0.34 | 11.8 | -1.23 | 1.45 | -0.24 | -- | -3.23 | 0.359 | 18.1 | 0.209 | 4697 | -- | -- |
| 53.99 | 0.342 | 11.8 | -1 | 1.43 | -0.582 | -- | -- | 0.462 | 18.1 | 0.9295 | 13049 | -- | -- |
| 162.24 | 0.593 | 11.8 | -1.22 | -- | -0.225 | -- | -2.84 | 0.324 | -- | 0.4989 | 4697 | -- | -- |
| 63.78 | 0.374 | 11.9 | -1 | 1.44 | -- | -0.00977 | -- | 0.34 | 18.1 | -- | -- | -- | -- |
| 63.78 | 0.374 | 11.9 | -1 | 1.44 | -- | -- | -- | 0.34 | 18.1 | -- | -- | -- | -- |
| 159.49 | 0.588 | 11.8 | -1.08 | -- | -0.652 | -- | -- | 0.46 | -- | 0.9891 | 18716 | -- | -- |
| 78.48 | 0.413 | 11.8 | -- | 1.42 | -0.625 | -- | -- | 0.506 | 18 | 4.435e-05 | 13305 | -- | -- |
| 171.28 | 0.612 | 11.8 | -1.04 | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
| 90.27 | 0.444 | 11.8 | -- | 1.45 | -- | -- | -- | 0.452 | 18.1 | -- | -- | -- | -- |
| 186.44 | 0.636 | 11.8 | -- | -- | -0.671 | -- | -- | 0.593 | -- | 0.4605 | 16131 | -- | -- |
| 199.98 | 0.66 | 11.8 | -- | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.81 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 3 | 48.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 4 | 48.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 8 | 49.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 16 | 49.32 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 17 | 49.32 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 7 |
| 26 | 49.55 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 48 | 50.01 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 53 | 50.06 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 73 | 50.33 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 76 | 50.33 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 9 |
| 77 | 50.34 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 81 | 50.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 83 | 50.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 93 | 50.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 102 | 50.51 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 104 | 50.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 108 | 50.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 114 | 50.54 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 116 | 50.54 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 118 | 50.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 123 | 50.56 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 9 |
| 139 | 50.61 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 140 | 50.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 142 | 50.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 187 | 50.71 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 188 | 50.71 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 196 | 50.74 | wind | 3.0 | 43200 | > th | dose independent | rect. | 24 | 9 |
| 224 | 50.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 292 | 50.92 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 327 | 50.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 6 |
| 328 | 50.97 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 21 | NA |
| 356 | 51.00 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 7 |
| 362 | 51.01 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 375 | 51.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 438 | 51.08 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 12 | 13 |
| 453 | 51.09 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 465 | 51.10 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 467 | 51.10 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 491 | 51.12 | wind | 9.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 524 | 51.14 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 533 | 51.15 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 539 | 51.15 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 6 | 5 |
| 588 | 51.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 599 | 51.19 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 641 | 51.22 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 664 | 51.23 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 699 | 51.26 | temperature | 20.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 713 | 51.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 719 | 51.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 807 | 51.33 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 854 | 51.36 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 857 | 51.36 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 862 | 51.36 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 882 | 51.37 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 903 | 51.38 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 976 | 51.42 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 12 | 14 |
| 980 | 51.42 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 18 | 2 |