Os11g0146000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0146000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.37 | 0.434 | 9.64 | -0.65 | 2.42 | -1.3 | 1.02 | 0.499 | -0.0432 | 16.8 | 4.329 | 156 | -- | -- |
| 86.36 | 0.433 | 9.63 | -0.646 | 2.42 | -1.3 | 0.654 | -- | -0.0335 | 16.8 | 4.749 | 159 | -- | -- |
| 87.65 | 0.436 | 9.64 | -0.64 | 2.43 | -1.27 | -- | 0.329 | -0.0472 | 16.7 | 4.807 | 159 | -- | -- |
| 87.48 | 0.436 | 9.63 | -0.642 | 2.43 | -1.28 | -- | -- | -0.0339 | 16.7 | 4.715 | 159 | -- | -- |
| 116.95 | 0.504 | 9.65 | -0.712 | -- | -3.21 | -- | 0.444 | -0.222 | -- | 0.9152 | 447 | -- | -- |
| 103.43 | 0.477 | 9.61 | -0.597 | 3.53 | -- | 0.425 | -- | 0.0231 | 15.4 | -- | -- | -- | -- |
| 103.99 | 0.478 | 9.6 | -0.589 | 3.53 | -- | -- | -- | 0.0255 | 15.4 | -- | -- | -- | -- |
| 112.36 | 0.494 | 9.63 | -0.882 | -- | -3.3 | -- | -- | -0.13 | -- | 0.83 | 461 | -- | -- |
| 98.19 | 0.462 | 9.62 | -- | 2.49 | -1.2 | -- | -- | 0.0407 | 16.6 | 5.394 | 159 | -- | -- |
| 803.24 | 1.32 | 9.61 | -0.738 | -- | -- | -- | -- | -0.0679 | -- | -- | -- | -- | -- |
| 113.15 | 0.498 | 9.59 | -- | 3.54 | -- | -- | -- | 0.0912 | 15.4 | -- | -- | -- | -- |
| 131.29 | 0.534 | 9.59 | -- | -- | -3.29 | -- | -- | -0.0209 | -- | 1.373 | 455 | -- | -- |
| 817.63 | 1.33 | 9.59 | -- | -- | -- | -- | -- | 0.014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 70.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 14 |
| 2 | 71.09 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 5 | 72.05 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 6 | 72.11 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 7 | 72.11 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 8 | 72.22 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 9 | 72.39 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 10 | 72.46 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 11 | 72.46 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 16 | 72.73 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 21 | 72.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 23 | 72.98 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 24 | 72.98 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 27 | 72.98 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 28 | 72.98 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 30 | 72.98 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 33 | 72.98 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 40 | 73.27 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 42 | 73.30 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 49 | 73.53 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 54 | 73.57 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 59 | 73.78 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 3 |
| 63 | 73.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 65 | 73.91 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 76 | 74.11 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 81 | 74.21 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 20 | 5 |
| 85 | 74.24 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 3 |
| 87 | 74.24 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 110 | 74.31 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 154 | 74.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 156 | 74.76 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 160 | 74.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 161 | 74.80 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 163 | 74.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 13 |
| 173 | 74.91 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 188 | 74.99 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 242 | 75.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 244 | 75.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 249 | 75.81 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 251 | 75.83 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 256 | 75.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 11 |
| 261 | 75.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 275 | 76.15 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 20 |
| 276 | 76.15 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 281 | 76.23 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 285 | 76.26 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 4 |
| 286 | 76.26 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 4 |
| 287 | 76.27 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 293 | 76.34 | temperature | 25.0 | 90 | < th | dose independent | rect. | 15 | 15 |
| 319 | 76.42 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 325 | 76.47 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 335 | 76.60 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 20 |
| 344 | 76.67 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 366 | 76.90 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 367 | 76.91 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 11 |
| 381 | 77.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 386 | 77.04 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 389 | 77.06 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 391 | 77.06 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 392 | 77.06 | humidity | 50.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 395 | 77.06 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 3 | 4 |
| 397 | 77.06 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 400 | 77.06 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 20 |
| 437 | 77.33 | wind | 9.0 | 10 | < th | dose independent | rect. | 7 | 20 |
| 443 | 77.37 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 454 | 77.42 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 519 | 77.66 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 522 | 77.70 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 4 | 3 |
| 531 | 77.77 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 2 |
| 547 | 77.85 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 576 | 77.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 11 |
| 579 | 77.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 11 |
| 599 | 78.04 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 600 | 78.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 603 | 78.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 608 | 78.04 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 613 | 78.04 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 614 | 78.04 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 616 | 78.04 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 622 | 78.05 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 634 | 78.10 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 5 |
| 643 | 78.13 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 13 |
| 658 | 78.16 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 667 | 78.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 11 |
| 671 | 78.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 686 | 78.27 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 699 | 78.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 11 |
| 700 | 78.28 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 11 |
| 701 | 78.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 11 |
| 703 | 78.28 | temperature | 10.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 705 | 78.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 11 |
| 782 | 78.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 13 |
| 790 | 78.50 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 889 | 78.67 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 4 |
| 891 | 78.69 | wind | 9.0 | 270 | < th | dose independent | rect. | 16 | 13 |
| 962 | 78.84 | humidity | 50.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 976 | 78.89 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 11 |