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Os11g0145200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.83 (0.0622) R2 : 0.526
β1 : -3.01 (0.288) R2dD : 0.325 R2D : 0.0183
β2 : 1.33 (0.117) R2dC : 0.142 R2C : 0.0702
β3 : 1.96 (0.358) R2dE : 0.104 R2E : -0.422
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 12.1 (0.863) R2dD*E : 0.396 R2D*E : 0.268
γ1 : -0.452 (0.127) R2dN8 : 0.0278 R2N8 : -0.0853
σ : 0.886
deviance : 361.87
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C
peak time of C : 13.3
E
wheather : radiation
threshold : 35.97
memory length : 4320
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18
open length of G : 9.94

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
347.1 0.875 5.82 -3 1.34 1.89 2 12.5 -0.423 13.6 40 4320 18 9.9
395.23 0.926 6.29 -1.87 1.2 1.63 0.586 -- -0.288 14.8 1.501 47520 18 9.58
361.87 0.886 5.83 -3.01 1.33 1.96 -- 12.1 -0.452 13.3 35.97 4320 18 9.94
394.64 0.925 6.27 -1.49 1.16 1.84 -- -- -0.148 14.1 0.998 47520 18 9.59
458.85 0.998 5.83 -3.38 -- 2.27 -- 12.2 -0.533 -- 43.79 4319 18 10.1
505.47 1.05 6.35 -2.17 1.28 -- 1.73 -- -0.785 14.6 -- -- -- --
514.14 1.06 6.34 -2.12 1.28 -- -- -- -0.777 14.1 -- -- -- --
471.02 1.01 6.27 -1.41 -- 1.93 -- -- -0.174 -- 0.7598 44552 18 9.8
396.79 0.928 6.19 -- 1.14 2.4 -- -- 0.277 14.4 0.1057 47520 17.1 9.03
613.04 1.16 6.35 -2.18 -- -- -- -- -0.807 -- -- -- -- --
632.91 1.18 6.29 -- 1.32 -- -- -- -0.54 14.1 -- -- -- --
471.8 1.01 6.27 -- -- 2.6 -- -- 0.0894 -- 0.6645 44469 19.9 10.5
737.99 1.27 6.3 -- -- -- -- -- -0.566 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 347.48 radiation 40 4320 < th dose dependent rect. 18 9
9 355.94 humidity 70 14400 > th dose independent rect. 19 12
10 356.27 humidity 70 14400 > th dose independent rect. 19 1
16 357.84 humidity 70 14400 > th dose independent rect. 19 8
21 358.27 humidity 70 14400 > th dose independent rect. 19 4
25 358.61 radiation 20 14400 > th dose dependent rect. 16 15
37 360.68 radiation 30 14400 < th dose independent rect. 15 16
39 360.95 radiation 30 14400 < th dose independent rect. 15 12
46 361.16 radiation 30 14400 < th dose independent rect. 15 8
48 361.21 radiation 30 14400 < th dose independent rect. 15 6
65 362.70 humidity 70 14400 < th dose independent rect. 19 1
68 362.80 humidity 70 14400 < th dose independent rect. 19 12
72 363.34 radiation 30 14400 > th dose dependent rect. 15 17
73 363.64 radiation 20 14400 > th dose dependent rect. 16 1
78 363.64 radiation 40 14400 < th dose dependent rect. 18 5
115 364.28 radiation 40 14400 < th dose dependent rect. 18 2
154 365.51 humidity 70 14400 < th dose independent rect. 18 4
176 366.51 radiation 40 14400 < th dose dependent rect. 17 13
177 366.53 atmosphere 1005 43200 > th dose independent rect. 17 3
179 366.58 radiation 1 14400 > th dose dependent rect. 17 12
184 366.76 atmosphere 1005 43200 < th dose independent rect. 16 4
189 366.89 radiation 40 14400 > th dose independent rect. 15 18
190 366.95 radiation 1 14400 > th dose dependent rect. 17 2
216 367.28 atmosphere 1005 43200 < th dose independent rect. 18 1
226 367.54 radiation 40 14400 > th dose dependent rect. 8 1
267 368.11 atmosphere 1005 43200 < th dose independent rect. 11 8
276 368.24 atmosphere 1005 43200 > th dose independent rect. 11 9
300 368.57 radiation 40 14400 < th dose independent rect. 8 1
417 370.29 radiation 40 14400 > th dose independent rect. 7 2
463 371.05 atmosphere 1005 43200 > th dose independent sin 19 NA
473 371.28 atmosphere 1005 43200 < th dose independent sin 19 NA
483 371.45 humidity 90 720 < th dose dependent rect. 18 5
497 371.84 humidity 90 720 < th dose dependent rect. 18 3
527 372.53 temperature 25 4320 > th dose independent rect. 9 2
561 372.95 temperature 25 4320 < th dose independent rect. 8 4
577 373.05 temperature 25 4320 > th dose independent rect. 8 4
676 374.09 radiation 40 14400 < th dose dependent rect. 22 8
710 374.33 radiation 10 14400 < th dose dependent rect. 22 8
748 374.82 radiation 10 14400 < th dose dependent rect. 2 4
750 374.84 atmosphere 1005 43200 > th dose dependent rect. 2 1
754 374.87 radiation 10 14400 < th dose dependent rect. 4 2
762 374.99 atmosphere 1005 43200 > th dose dependent rect. 4 1
763 374.99 atmosphere 1005 43200 > th dose dependent rect. 2 3
766 375.06 radiation 40 14400 > th dose dependent sin 12 NA
861 375.59 radiation 1 1440 > th dose dependent rect. 18 12
908 375.83 radiation 40 14400 < th dose independent sin 12 NA
938 376.00 humidity 80 43200 > th dose dependent rect. 10 1