Os11g0145100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DTW domain containing protein.
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Os11g0145100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DTW domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.1 | 0.274 | 8.26 | 0.71 | 0.598 | 0.635 | 0.774 | -0.517 | 0.458 | 18.9 | 69.02 | 1361 | -- | -- |
| 34.41 | 0.273 | 8.26 | 0.657 | 0.595 | 0.616 | 0.765 | -- | 0.447 | 19 | 69.38 | 1346 | -- | -- |
| 35.64 | 0.278 | 8.26 | 0.697 | 0.598 | 0.63 | -- | -0.498 | 0.462 | 19 | 69 | 1343 | -- | -- |
| 35.94 | 0.279 | 8.26 | 0.641 | 0.597 | 0.613 | -- | -- | 0.449 | 19 | 70 | 1355 | -- | -- |
| 54.43 | 0.344 | 8.25 | 0.686 | -- | 0.7 | -- | -0.524 | 0.454 | -- | 68.89 | 1351 | -- | -- |
| 40.18 | 0.297 | 8.28 | 0.658 | 0.623 | -- | 0.775 | -- | 0.377 | 18.7 | -- | -- | -- | -- |
| 41.7 | 0.302 | 8.28 | 0.645 | 0.625 | -- | -- | -- | 0.379 | 18.7 | -- | -- | -- | -- |
| 54.77 | 0.345 | 8.25 | 0.624 | -- | 0.687 | -- | -- | 0.447 | -- | 70.36 | 1356 | -- | -- |
| 45.6 | 0.315 | 8.27 | -- | 0.609 | 0.717 | -- | -- | 0.395 | 18.9 | 81.43 | 1404 | -- | -- |
| 62.1 | 0.368 | 8.26 | 0.631 | -- | -- | -- | -- | 0.367 | -- | -- | -- | -- | -- |
| 52.68 | 0.34 | 8.29 | -- | 0.617 | -- | -- | -- | 0.307 | 18.8 | -- | -- | -- | -- |
| 64.1 | 0.373 | 8.26 | -- | -- | 0.77 | -- | -- | 0.399 | -- | 80 | 1370 | -- | -- |
| 72.61 | 0.398 | 8.28 | -- | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.99 | humidity | 80 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 3 | 33.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 11 | 33.19 | humidity | 80 | 1440 | < th | dose independent | rect. | 24 | 17 |
| 12 | 33.19 | humidity | 70 | 1440 | > th | dose dependent | rect. | 1 | 16 |
| 13 | 33.19 | humidity | 70 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 33 | 33.29 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 61 | 33.38 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 78 | 33.42 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |
| 79 | 33.42 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 120 | 33.52 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 125 | 33.53 | humidity | 70 | 1440 | > th | dose dependent | sin | 2 | NA |
| 131 | 33.55 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 139 | 33.58 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 191 | 33.73 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 9 |
| 276 | 34.00 | humidity | 70 | 720 | > th | dose dependent | sin | 14 | NA |
| 306 | 34.07 | humidity | 70 | 720 | > th | dose dependent | rect. | 15 | 12 |
| 347 | 34.14 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 359 | 34.16 | humidity | 90 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 362 | 34.16 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 376 | 34.20 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 410 | 34.24 | humidity | 90 | 720 | > th | dose dependent | sin | 20 | NA |
| 428 | 34.27 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 430 | 34.28 | humidity | 70 | 1440 | > th | dose dependent | no | NA | NA |
| 454 | 34.30 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 476 | 34.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 9 |
| 483 | 34.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 485 | 34.33 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 502 | 34.35 | humidity | 70 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 521 | 34.37 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 530 | 34.38 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 607 | 34.44 | humidity | 70 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 643 | 34.48 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 653 | 34.49 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 4 |
| 666 | 34.50 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 7 |
| 707 | 34.53 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 797 | 34.59 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 7 |
| 877 | 34.64 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 917 | 34.66 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 925 | 34.66 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 13 |
| 944 | 34.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 986 | 34.69 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 15 |