Os11g0143600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0143600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.08 | 0.607 | 3.08 | 0.219 | 0.0163 | 0.755 | 0.265 | 2.01 | 0.21 | 23.1 | 22.06 | 4645 | -- | -- |
| 173.18 | 0.613 | 3.01 | 0.754 | 0.029 | 0.638 | 0.305 | -- | 0.291 | 23.1 | 24.3 | 4764 | -- | -- |
| 167.36 | 0.603 | 3.08 | 0.205 | 0.026 | 0.754 | -- | 2.02 | 0.208 | 2.94 | 22.05 | 4648 | -- | -- |
| 173.51 | 0.613 | 3.01 | 0.738 | 0.0366 | 0.634 | -- | -- | 0.291 | 1.73 | 24.36 | 4764 | -- | -- |
| 167.4 | 0.603 | 3.08 | 0.206 | -- | 0.753 | -- | 2.02 | 0.208 | -- | 22.05 | 4645 | -- | -- |
| 184.98 | 0.638 | 3.04 | 0.462 | 0.00426 | -- | 0.267 | -- | 0.125 | 23.5 | -- | -- | -- | -- |
| 185.28 | 0.637 | 3.04 | 0.451 | 0.013 | -- | -- | -- | 0.124 | 4.7 | -- | -- | -- | -- |
| 173.58 | 0.614 | 3.01 | 0.735 | -- | 0.628 | -- | -- | 0.289 | -- | 24.37 | 4764 | -- | -- |
| 184.57 | 0.633 | 3.02 | -- | 0.0707 | 0.44 | -- | -- | 0.158 | 1.7 | 27.2 | 2500 | -- | -- |
| 185.28 | 0.636 | 3.04 | 0.452 | -- | -- | -- | -- | 0.124 | -- | -- | -- | -- | -- |
| 190.64 | 0.646 | 3.05 | -- | 0.0215 | -- | -- | -- | 0.0733 | 4.11 | -- | -- | -- | -- |
| 184.88 | 0.633 | 3.04 | -- | -- | 0.389 | -- | -- | 0.142 | -- | 27.18 | 2389 | -- | -- |
| 190.67 | 0.645 | 3.05 | -- | -- | -- | -- | -- | 0.0738 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.00 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 2 | 157.02 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 3 | 157.18 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 7 | 157.18 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 27 | 157.75 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 37 | 158.58 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 45 | 159.43 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 46 | 159.43 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 107 | 166.58 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 108 | 166.68 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 109 | 166.71 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 110 | 166.77 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 128 | 167.29 | wind | 3.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 130 | 167.31 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 135 | 167.39 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 137 | 167.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 150 | 167.54 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 3 | 5 |
| 203 | 167.78 | wind | 1.0 | 720 | < th | dose independent | rect. | 18 | 4 |
| 218 | 167.81 | wind | 1.0 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 313 | 168.18 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 333 | 168.22 | wind | 1.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 338 | 168.23 | temperature | 25.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 385 | 168.33 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 24 | 14 |
| 404 | 168.37 | wind | 9.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 405 | 168.37 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 407 | 168.37 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 408 | 168.37 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 411 | 168.37 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 412 | 168.37 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 414 | 168.37 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 419 | 168.37 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 420 | 168.37 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 421 | 168.37 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 426 | 168.37 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 432 | 168.39 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 534 | 168.52 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 13 | 19 |
| 578 | 168.60 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 583 | 168.61 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 598 | 168.62 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 610 | 168.63 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 854 | 168.94 | temperature | 25.0 | 4320 | < th | dose dependent | no | NA | NA |
| 889 | 168.99 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 971 | 169.10 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 5 | 1 |