FiT-DB / Search/ Help/ Sample detail

Os11g0143200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 90A1 (EC 1.14.-.-).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.78 (0.0259) R2 : 0.188
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.561 (0.0546) R2dN8 : 0.243 R2N8 : 0.188
σ : 0.488
deviance : 109.34
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
78.58 0.416 9.76 -0.0428 0.446 1.15 0.96 -0.166 -0.464 16.8 0.15 1476 -- --
78.58 0.413 9.76 -0.0541 0.45 1.2 0.976 -- -0.464 16.7 0.14 1480 -- --
80.56 0.418 9.76 -0.0755 0.431 1.32 -- 0.647 -0.455 17.9 0.17 1438 -- --
80.41 0.418 9.76 -0.0563 0.452 1.12 -- -- -0.467 18.1 0.14 1438 -- --
90.92 0.444 9.76 -0.107 -- 1.26 -- 0.48 -0.462 -- 0.1301 1441 -- --
93.14 0.452 9.8 -0.364 0.438 -- 0.919 -- -0.597 17.3 -- -- -- --
94.69 0.456 9.8 -0.368 0.457 -- -- -- -0.594 18.1 -- -- -- --
91.01 0.444 9.76 -0.0648 -- 1.15 -- -- -0.474 -- 0.1397 1444 -- --
80.48 0.418 9.76 -- 0.459 1.15 -- -- -0.462 18.1 0.14 1438 -- --
105.51 0.48 9.79 -0.381 -- -- -- -- -0.604 -- -- -- -- --
98.26 0.464 9.79 -- 0.462 -- -- -- -0.553 18.1 -- -- -- --
91.09 0.445 9.76 -- -- 1.18 -- -- -0.46 -- 0.13 1444 -- --
109.34 0.488 9.78 -- -- -- -- -- -0.561 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 76.88 radiation 1.0 1440 < th dose dependent sin 11 NA
2 76.98 radiation 1.0 1440 < th dose dependent rect. 16 19
4 77.02 radiation 1.0 1440 < th dose dependent rect. 18 17
22 77.50 radiation 1.0 720 > th dose independent rect. 17 20
29 77.86 radiation 1.0 1440 < th dose dependent rect. 18 12
44 78.32 radiation 1.0 1440 < th dose independent rect. 16 19
45 78.35 radiation 1.0 1440 < th dose independent rect. 16 14
49 78.40 radiation 1.0 1440 > th dose independent rect. 16 14
52 78.42 radiation 1.0 1440 < th dose independent sin 12 NA
60 78.50 atmosphere 1015.0 1440 < th dose independent rect. 2 5
67 78.58 radiation 1.0 1440 > th dose independent sin 12 NA
88 78.88 radiation 1.0 1440 < th dose dependent rect. 22 13
124 79.05 radiation 1.0 1440 < th dose dependent rect. 3 8
138 79.12 wind 5.0 270 < th dose independent rect. 5 19
142 79.14 radiation 1.0 720 < th dose dependent rect. 5 20
159 79.26 radiation 1.0 1440 < th dose dependent rect. 18 8
166 79.30 radiation 1.0 14400 < th dose independent rect. 18 11
168 79.31 radiation 40.0 1440 < th dose dependent rect. 18 8
171 79.34 humidity 50.0 43200 > th dose independent rect. 22 6
172 79.35 radiation 1.0 14400 < th dose independent rect. 18 8
179 79.37 radiation 1.0 1440 < th dose dependent rect. 4 22
180 79.37 radiation 1.0 1440 < th dose dependent rect. 22 22
184 79.38 radiation 1.0 1440 < th dose dependent no NA NA
200 79.40 temperature 15.0 270 > th dose independent rect. 22 23
218 79.43 radiation 1.0 1440 < th dose dependent rect. 10 23
221 79.44 radiation 1.0 14400 < th dose independent rect. 18 2
222 79.44 radiation 1.0 1440 < th dose dependent rect. 3 17
232 79.45 radiation 1.0 1440 < th dose dependent rect. 4 15
270 79.60 temperature 15.0 270 > th dose independent rect. 4 23
272 79.60 radiation 1.0 1440 < th dose dependent rect. 16 10
304 79.72 radiation 1.0 1440 < th dose dependent rect. 18 2
320 79.78 radiation 1.0 1440 < th dose dependent rect. 16 4
330 79.83 temperature 10.0 30 > th dose dependent rect. 1 5
331 79.85 atmosphere 1015.0 1440 < th dose independent rect. 2 8
339 79.88 wind 5.0 14400 > th dose independent rect. 13 1
340 79.88 temperature 15.0 270 > th dose independent rect. 5 20
343 79.90 radiation 20.0 4320 < th dose independent rect. 2 4
348 79.91 wind 5.0 14400 < th dose independent rect. 12 2
369 80.00 temperature 10.0 270 > th dose dependent rect. 1 3
374 80.01 humidity 70.0 14400 < th dose dependent rect. 18 3
380 80.05 radiation 20.0 4320 < th dose independent rect. 4 2
385 80.06 atmosphere 1015.0 270 < th dose dependent rect. 24 5
397 80.09 humidity 80.0 270 > th dose independent rect. 5 19
399 80.11 atmosphere 1015.0 90 < th dose independent rect. 6 19
419 80.19 temperature 10.0 90 > th dose dependent rect. 7 20
422 80.21 wind 7.0 14400 > th dose independent rect. 15 1
424 80.21 wind 5.0 14400 > th dose dependent rect. 15 1
425 80.22 wind 7.0 14400 < th dose independent rect. 15 1
428 80.23 atmosphere 1015.0 270 < th dose dependent rect. 1 2
442 80.28 radiation 40.0 1440 < th dose dependent rect. 18 10
443 80.29 precipitation 0.1 90 < th dose independent rect. 1 5
445 80.29 precipitation 0.1 90 < th dose dependent rect. 1 5
455 80.32 precipitation 0.1 270 < th dose independent rect. 1 3
456 80.32 radiation 1.0 1440 < th dose independent rect. 4 22
459 80.32 precipitation 0.1 270 < th dose dependent rect. 1 3
461 80.33 radiation 1.0 1440 < th dose independent rect. 22 22
464 80.33 humidity 70.0 270 > th dose dependent rect. 5 19
465 80.34 radiation 1.0 1440 < th dose independent no NA NA
491 80.36 temperature 10.0 270 > th dose dependent rect. 7 17
496 80.38 radiation 10.0 90 < th dose independent rect. 1 5
497 80.38 wind 5.0 270 < th dose independent rect. 5 9
500 80.39 radiation 1.0 1440 > th dose independent no NA NA
502 80.39 radiation 1.0 1440 > th dose independent rect. 4 15
551 80.39 radiation 1.0 1440 < th dose independent rect. 10 23
553 80.40 radiation 1.0 1440 < th dose independent rect. 3 16
560 80.40 radiation 1.0 270 < th dose independent rect. 5 19
565 80.41 temperature 15.0 1440 > th dose independent rect. 7 8
583 80.43 precipitation 0.1 10 < th dose independent rect. 1 5
597 80.43 precipitation 0.1 10 < th dose dependent rect. 1 5
601 80.44 radiation 1.0 1440 > th dose independent rect. 10 23
607 80.45 wind 9.0 14400 < th dose independent rect. 23 3
627 80.49 temperature 10.0 90 > th dose dependent rect. 9 18
628 80.50 radiation 1.0 4320 > th dose dependent rect. 7 1
636 80.52 radiation 40.0 4320 < th dose dependent rect. 7 1
643 80.55 wind 9.0 270 < th dose dependent rect. 1 3
648 80.56 wind 9.0 90 < th dose dependent rect. 1 5
650 80.57 temperature 15.0 1440 > th dose independent rect. 22 4
651 80.57 radiation 1.0 1440 < th dose independent rect. 16 10
656 80.58 radiation 1.0 270 < th dose independent rect. 4 21
658 80.58 radiation 1.0 4320 > th dose dependent rect. 4 4
687 80.65 radiation 1.0 4320 < th dose independent rect. 16 3
692 80.65 temperature 20.0 270 > th dose independent rect. 6 18
707 80.70 temperature 15.0 1440 > th dose independent rect. 7 10
710 80.70 wind 9.0 270 < th dose dependent rect. 5 19
722 80.72 radiation 20.0 90 < th dose dependent rect. 1 5
728 80.73 radiation 20.0 4320 < th dose independent rect. 2 6
742 80.75 wind 9.0 90 < th dose independent rect. 1 5
743 80.75 temperature 10.0 90 > th dose independent rect. 1 5
745 80.75 temperature 30.0 90 < th dose independent rect. 1 5
746 80.75 humidity 50.0 90 > th dose independent rect. 1 5
750 80.75 atmosphere 995.0 90 > th dose independent rect. 1 5
751 80.75 atmosphere 1010.0 90 < th dose independent rect. 1 5
769 80.77 radiation 1.0 1440 > th dose independent rect. 16 3
796 80.80 wind 9.0 270 < th dose independent rect. 1 3
797 80.80 temperature 10.0 270 > th dose independent rect. 1 3
799 80.80 temperature 30.0 270 < th dose independent rect. 1 3
800 80.80 humidity 50.0 270 > th dose independent rect. 1 3
803 80.80 atmosphere 995.0 270 > th dose independent rect. 1 3
804 80.80 atmosphere 1010.0 270 < th dose independent rect. 1 3
806 80.80 radiation 1.0 270 < th dose independent rect. 1 3
814 80.80 radiation 1.0 270 < th dose dependent rect. 1 3
828 80.81 radiation 40.0 4320 < th dose dependent rect. 2 6
854 80.85 radiation 1.0 14400 > th dose independent rect. 18 1
873 80.86 wind 7.0 14400 < th dose dependent rect. 11 2
876 80.87 wind 5.0 14400 > th dose independent rect. 11 5
880 80.87 temperature 15.0 270 > th dose independent rect. 9 15
908 80.90 humidity 60.0 14400 < th dose independent rect. 17 3
921 80.90 humidity 90.0 14400 < th dose dependent rect. 3 1
922 80.90 wind 1.0 14400 > th dose dependent rect. 11 2
934 80.91 humidity 50.0 90 > th dose dependent rect. 1 5
936 80.91 temperature 10.0 10 > th dose dependent rect. 6 21
955 80.94 wind 9.0 1440 < th dose independent rect. 2 5
957 80.94 temperature 10.0 1440 > th dose independent rect. 2 5
960 80.94 temperature 30.0 1440 < th dose independent rect. 2 5
964 80.94 humidity 50.0 1440 > th dose independent rect. 2 5
969 80.94 atmosphere 995.0 1440 > th dose independent rect. 2 5
970 80.94 radiation 40.0 1440 < th dose independent rect. 2 5
974 80.94 temperature 10.0 1440 > th dose independent rect. 7 19
987 80.95 humidity 50.0 1440 > th dose dependent rect. 16 18