Os11g0142300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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Os11g0142300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 422.6 | 0.966 | 3.11 | -0.0981 | 0.334 | 0.484 | -0.397 | 1.07 | -0.224 | 10.7 | 69.4 | 6 | -- | -- |
| 426.58 | 0.962 | 3.12 | -0.142 | 0.323 | 0.496 | 0.184 | -- | -0.23 | 10.8 | 69 | 6 | -- | -- |
| 422.78 | 0.958 | 3.12 | -0.118 | 0.331 | 0.495 | -- | 0.91 | -0.226 | 10.5 | 69.2 | 6 | -- | -- |
| 426.72 | 0.962 | 3.12 | -0.136 | 0.321 | 0.498 | -- | -- | -0.23 | 10.7 | 69.15 | 6 | -- | -- |
| 428.37 | 0.964 | 3.12 | -0.131 | -- | 0.61 | -- | 0.861 | -0.224 | -- | 69.19 | 6 | -- | -- |
| 439.57 | 0.983 | 3.12 | -0.101 | 0.628 | -- | 0.242 | -- | -0.236 | 12.5 | -- | -- | -- | -- |
| 439.82 | 0.982 | 3.12 | -0.0917 | 0.627 | -- | -- | -- | -0.235 | 12.5 | -- | -- | -- | -- |
| 431.92 | 0.968 | 3.13 | -0.149 | -- | 0.615 | -- | -- | -0.229 | -- | 69.39 | 6 | -- | -- |
| 427.21 | 0.963 | 3.12 | -- | 0.325 | 0.492 | -- | -- | -0.215 | 10.8 | 69.4 | 6 | -- | -- |
| 464.48 | 1.01 | 3.13 | -0.113 | -- | -- | -- | -- | -0.245 | -- | -- | -- | -- | -- |
| 440.04 | 0.981 | 3.12 | -- | 0.628 | -- | -- | -- | -0.225 | 12.5 | -- | -- | -- | -- |
| 432.5 | 0.969 | 3.12 | -- | -- | 0.613 | -- | -- | -0.212 | -- | 69.9 | 6 | -- | -- |
| 464.82 | 1.01 | 3.13 | -- | -- | -- | -- | -- | -0.233 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 416.85 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 418.33 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 3 | 418.42 | humidity | 80.0 | 90 | < th | dose independent | sin | 2 | NA |
| 4 | 418.50 | radiation | 1.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 7 | 419.11 | humidity | 70.0 | 10 | < th | dose independent | rect. | 19 | 22 |
| 8 | 419.15 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 3 |
| 9 | 419.22 | humidity | 80.0 | 90 | > th | dose independent | sin | 2 | NA |
| 10 | 419.40 | humidity | 80.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 13 | 419.60 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 15 | 419.73 | temperature | 20.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 18 | 419.73 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 33 | 420.25 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 35 | 420.45 | humidity | 70.0 | 10 | < th | dose independent | rect. | 9 | 8 |
| 37 | 420.56 | humidity | 70.0 | 90 | > th | dose dependent | sin | 1 | NA |
| 38 | 420.57 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 12 | 5 |
| 56 | 420.79 | humidity | 70.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 63 | 420.91 | humidity | 60.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 64 | 420.95 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 111 | 421.65 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 113 | 421.68 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 115 | 421.82 | humidity | 70.0 | 10 | < th | dose independent | sin | 1 | NA |
| 120 | 421.91 | radiation | 20.0 | 270 | < th | dose dependent | sin | 3 | NA |
| 122 | 421.96 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 127 | 422.07 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 133 | 422.13 | humidity | 60.0 | 10 | < th | dose independent | rect. | 12 | 5 |
| 146 | 422.32 | wind | 5.0 | 10 | > th | dose independent | rect. | 7 | 3 |
| 160 | 422.50 | radiation | 1.0 | 720 | > th | dose independent | rect. | 5 | 4 |
| 189 | 422.77 | radiation | 20.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 203 | 422.96 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 204 | 422.97 | radiation | 20.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 213 | 423.01 | humidity | 70.0 | 10 | < th | dose independent | rect. | 9 | 11 |
| 256 | 423.10 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 263 | 423.13 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 265 | 423.14 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 20 | 23 |
| 268 | 423.17 | humidity | 70.0 | 10 | < th | dose independent | no | NA | NA |
| 348 | 423.26 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 349 | 423.28 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 362 | 423.36 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 364 | 423.38 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 10 |
| 375 | 423.39 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 392 | 423.45 | radiation | 10.0 | 10 | > th | dose independent | rect. | 9 | 9 |
| 422 | 423.53 | radiation | 20.0 | 270 | < th | dose independent | rect. | 9 | 22 |
| 423 | 423.54 | wind | 5.0 | 10 | > th | dose independent | rect. | 3 | 7 |
| 462 | 423.66 | humidity | 70.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 463 | 423.66 | humidity | 70.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 464 | 423.67 | radiation | 1.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 472 | 423.70 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 477 | 423.72 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 4 |
| 505 | 423.76 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 523 | 423.78 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 524 | 423.78 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 3 |
| 573 | 423.90 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 590 | 423.92 | radiation | 10.0 | 270 | < th | dose independent | sin | 2 | NA |
| 630 | 424.01 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 642 | 424.07 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 644 | 424.08 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 681 | 424.19 | radiation | 20.0 | 270 | < th | dose independent | rect. | 21 | 21 |
| 683 | 424.20 | humidity | 70.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 684 | 424.20 | wind | 5.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 705 | 424.28 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 5 |
| 708 | 424.29 | radiation | 10.0 | 270 | < th | dose independent | rect. | 7 | 23 |
| 721 | 424.34 | humidity | 70.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 724 | 424.35 | radiation | 1.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 733 | 424.38 | humidity | 70.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 747 | 424.42 | temperature | 20.0 | 720 | < th | dose independent | rect. | 6 | 2 |
| 764 | 424.47 | radiation | 10.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 768 | 424.50 | wind | 5.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 835 | 424.60 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 7 |
| 837 | 424.60 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 23 |
| 865 | 424.63 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 10 |
| 922 | 424.75 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 16 | 4 |
| 939 | 424.77 | humidity | 70.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 953 | 424.80 | humidity | 70.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 966 | 424.82 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 6 |
| 973 | 424.83 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 995 | 424.87 | radiation | 10.0 | 720 | < th | dose independent | rect. | 8 | 4 |