Os11g0141800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0141800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64 | 0.376 | 11.6 | 0.106 | 2.02 | -1.63 | -0.371 | 0.488 | 0.121 | 22 | 25.5 | 726 | -- | -- |
| 64.26 | 0.373 | 11.5 | 0.181 | 2.03 | -1.68 | -0.483 | -- | 0.13 | 21.9 | 25.51 | 845 | -- | -- |
| 64.46 | 0.374 | 11.6 | 0.0799 | 2.02 | -1.61 | -- | 0.731 | 0.112 | 22 | 25.65 | 730 | -- | -- |
| 65.15 | 0.376 | 11.5 | 0.197 | 2.05 | -1.69 | -- | -- | 0.142 | 21.9 | 25.25 | 844 | -- | -- |
| 254.24 | 0.743 | 11.5 | -0.096 | -- | -3.11 | -- | 0.576 | 0.0725 | -- | 31.96 | 762 | -- | -- |
| 105.8 | 0.482 | 11.5 | 0.659 | 2.28 | -- | -0.536 | -- | 0.5 | 22 | -- | -- | -- | -- |
| 106.92 | 0.484 | 11.5 | 0.68 | 2.28 | -- | -- | -- | 0.501 | 22 | -- | -- | -- | -- |
| 252.87 | 0.741 | 11.5 | -0.175 | -- | -3.23 | -- | -- | -0.0977 | -- | 30.4 | 752 | -- | -- |
| 65.95 | 0.378 | 11.6 | -- | 2.08 | -1.78 | -- | -- | 0.1 | 21.8 | 25.34 | 978 | -- | -- |
| 421.13 | 0.959 | 11.4 | 0.708 | -- | -- | -- | -- | 0.502 | -- | -- | -- | -- | -- |
| 119.1 | 0.51 | 11.5 | -- | 2.29 | -- | -- | -- | 0.425 | 22 | -- | -- | -- | -- |
| 253.47 | 0.742 | 11.5 | -- | -- | -3.14 | -- | -- | -0.0729 | -- | 30.41 | 752 | -- | -- |
| 434.33 | 0.973 | 11.4 | -- | -- | -- | -- | -- | 0.424 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 3 | 60.92 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 5 | 61.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 14 | 61.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 24 | 61.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 18 |
| 67 | 62.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 21 |
| 70 | 62.57 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 86 | 62.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 105 | 62.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 132 | 63.07 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 185 | 63.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 207 | 63.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 10 |
| 241 | 63.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 9 |
| 250 | 63.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 256 | 63.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 354 | 63.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 429 | 64.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 476 | 64.13 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 704 | 64.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 736 | 64.63 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 784 | 64.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 801 | 64.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |