Os11g0141000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to PP2A regulatory subunit-like protein.
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Os11g0141000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to PP2A regulatory subunit-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.61 | 0.197 | 10.2 | -0.274 | 0.258 | -0.098 | 0.0756 | -1.02 | -0.116 | 17.1 | 20.8 | 1808 | -- | -- |
| 19.56 | 0.208 | 10.2 | -0.0351 | 0.262 | -0.0588 | 0.00207 | -- | -0.0511 | 16.7 | 20.8 | 1808 | -- | -- |
| 17.63 | 0.196 | 10.2 | -0.275 | 0.258 | -0.0957 | -- | -1.02 | -0.116 | 17 | 20.85 | 1819 | -- | -- |
| 19.31 | 0.205 | 10.2 | -0.0268 | 0.247 | -0.112 | -- | -- | -0.0417 | 16.9 | 24.9 | 2299 | -- | -- |
| 21.12 | 0.214 | 10.2 | -0.276 | -- | -0.0837 | -- | -0.989 | -0.123 | -- | 20.7 | 1809 | -- | -- |
| 19.72 | 0.208 | 10.2 | -0.0489 | 0.252 | -- | 0.0161 | -- | -0.0637 | 17 | -- | -- | -- | -- |
| 19.72 | 0.208 | 10.2 | -0.0488 | 0.252 | -- | -- | -- | -0.0636 | 16.9 | -- | -- | -- | -- |
| 22.33 | 0.22 | 10.2 | 0.000925 | -- | -0.165 | -- | -- | -0.0306 | -- | 24.8 | 2620 | -- | -- |
| 19.26 | 0.204 | 10.2 | -- | 0.255 | -0.129 | -- | -- | -0.0307 | 17.3 | 24.9 | 2252 | -- | -- |
| 23.07 | 0.224 | 10.2 | -0.058 | -- | -- | -- | -- | -0.0701 | -- | -- | -- | -- | -- |
| 19.78 | 0.208 | 10.2 | -- | 0.253 | -- | -- | -- | -0.0582 | 16.9 | -- | -- | -- | -- |
| 21.59 | 0.216 | 10.2 | -- | -- | -0.207 | -- | -- | 0.00279 | -- | 24.99 | 1128 | -- | -- |
| 23.16 | 0.225 | 10.2 | -- | -- | -- | -- | -- | -0.0636 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 5 | 17.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 6 | 17.32 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 8 | 17.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 23 | 17.37 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 26 | 17.39 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 28 | 17.39 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 34 | 17.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 44 | 17.41 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 45 | 17.42 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 3 |
| 50 | 17.43 | wind | 7 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 64 | 17.46 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 65 | 17.46 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 67 | 17.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 3 |
| 74 | 17.46 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 97 | 17.50 | wind | 5 | 720 | < th | dose independent | rect. | 18 | 1 |
| 98 | 17.50 | temperature | 25 | 720 | < th | dose independent | rect. | 23 | 2 |
| 107 | 17.51 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 118 | 17.52 | wind | 5 | 720 | < th | dose independent | rect. | 17 | 3 |
| 147 | 17.55 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 148 | 17.55 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 152 | 17.55 | wind | 7 | 4320 | > th | dose independent | rect. | 13 | 5 |
| 163 | 17.56 | wind | 7 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 184 | 17.57 | wind | 7 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 188 | 17.57 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 204 | 17.58 | wind | 7 | 4320 | > th | dose independent | rect. | 13 | 8 |
| 205 | 17.58 | wind | 7 | 4320 | < th | dose independent | rect. | 13 | 8 |
| 212 | 17.59 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 227 | 17.59 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 285 | 17.62 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 286 | 17.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 324 | 17.64 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 22 |
| 372 | 17.66 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 424 | 17.68 | wind | 7 | 4320 | > th | dose dependent | rect. | 13 | 5 |
| 427 | 17.68 | wind | 7 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 489 | 17.70 | radiation | 40 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 525 | 17.71 | wind | 7 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 532 | 17.72 | wind | 5 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 564 | 17.72 | wind | 5 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 573 | 17.73 | wind | 5 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 628 | 17.74 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 17 | 12 |
| 641 | 17.74 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 5 |
| 695 | 17.76 | wind | 5 | 270 | < th | dose independent | rect. | 18 | 11 |
| 711 | 17.76 | wind | 5 | 90 | < th | dose independent | rect. | 11 | 19 |
| 720 | 17.76 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 722 | 17.76 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 777 | 17.78 | wind | 5 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 816 | 17.79 | humidity | 80 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 820 | 17.79 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 17 | 6 |
| 857 | 17.80 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 941 | 17.82 | atmosphere | 1005 | 14400 | < th | dose independent | sin | 15 | NA |
| 984 | 17.83 | humidity | 90 | 14400 | > th | dose independent | rect. | 7 | 1 |