Os11g0138300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os11g0138300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 314.34 | 0.833 | 3.6 | 0.652 | 0.69 | 2.01 | 0.218 | 3.79 | -0.0258 | 7.21 | 15.12 | 82 | 3.75 | 3.14 |
| 322.41 | 0.836 | 3.6 | 0.527 | 0.77 | 2.11 | 0.452 | -- | -0.00143 | 6.93 | 15.64 | 85 | 3.75 | 2.93 |
| 313.88 | 0.825 | 3.6 | 0.686 | 0.67 | 2 | -- | 4.15 | -0.0252 | 7.3 | 14.65 | 84 | 3.69 | 3.22 |
| 323.01 | 0.837 | 3.59 | 0.401 | 0.789 | 2.17 | -- | -- | -0.0243 | 7.06 | 15.59 | 91 | 3.65 | 2.93 |
| 326.69 | 0.842 | 3.62 | 0.645 | -- | 2.41 | -- | 4.07 | -0.032 | -- | 12.94 | 94 | 3.52 | 3.43 |
| 416.27 | 0.956 | 3.55 | 0.45 | 1.68 | -- | 1.57 | -- | 0.129 | 6.27 | -- | -- | -- | -- |
| 422.31 | 0.962 | 3.55 | 0.469 | 1.69 | -- | -- | -- | 0.124 | 6.35 | -- | -- | -- | -- |
| 338.13 | 0.856 | 3.61 | 0.494 | -- | 2.83 | -- | -- | 0.0415 | -- | 14.77 | 117 | 3.38 | 3.15 |
| 325.12 | 0.84 | 3.6 | -- | 0.733 | 2.32 | -- | -- | -0.0665 | 7.2 | 16.19 | 108 | 3.52 | 2.92 |
| 570.83 | 1.12 | 3.58 | 0.514 | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
| 428.12 | 0.968 | 3.56 | -- | 1.7 | -- | -- | -- | 0.0721 | 6.33 | -- | -- | -- | -- |
| 339.66 | 0.858 | 3.63 | -- | -- | 2.79 | -- | -- | -0.0707 | -- | 14.81 | 122 | 3.35 | 3.18 |
| 577.8 | 1.12 | 3.59 | -- | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 321.19 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 6 | 323.47 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 7 | 323.75 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 12 | 325.92 | wind | 9.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 13 | 325.96 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 14 | 326.09 | wind | 5.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 16 | 326.35 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 17 | 326.35 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 21 | 326.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 23 | 326.48 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 24 | 326.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 27 | 326.48 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 28 | 326.48 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 29 | 326.48 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 32 | 326.48 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 39 | 327.28 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 68 | 328.95 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 70 | 329.19 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 21 |
| 71 | 329.19 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 79 | 329.51 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 91 | 331.30 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 108 | 332.99 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 109 | 332.99 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 118 | 333.50 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 163 | 335.13 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 172 | 335.74 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 207 | 338.00 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 8 |
| 215 | 338.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 220 | 338.76 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 330 | 341.26 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 347 | 342.17 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 367 | 342.73 | wind | 9.0 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 377 | 343.31 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 378 | 343.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 381 | 343.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 385 | 343.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 390 | 343.31 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 3 |
| 391 | 343.31 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 392 | 343.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 21 |
| 578 | 347.79 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 591 | 348.06 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 632 | 349.20 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 5 | 3 |
| 738 | 350.13 | humidity | 50.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 745 | 350.22 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 21 | 4 |
| 748 | 350.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 9 |
| 761 | 350.41 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 766 | 350.45 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 14 |
| 791 | 350.57 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 793 | 350.61 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 997 | 354.02 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 10 |