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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0134600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.0349) R2 : 0.0315
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.283 (0.0735) R2dN8 : 0.0407 R2N8 : 0.0315
σ : 0.657
deviance : 198.19
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
191.42 0.65 3.03 -0.0287 0.107 -0.486 0.033 1.47 0.276 22.9 1.03 16 -- --
193.26 0.647 3.01 0.0284 0.112 -0.387 -0.0508 -- 0.29 22.9 1.091 16 -- --
191.42 0.644 3.03 -0.0298 0.107 -0.487 -- 1.46 0.276 22.8 1.03 16 -- --
193.26 0.647 3.01 0.0291 0.105 -0.376 -- -- 0.292 23.5 1 16 -- --
192.13 0.646 3.03 -0.0287 -- -0.499 -- 1.45 0.277 -- 1.018 16 -- --
196.32 0.657 3.01 0.0754 0.167 -- 0.0117 -- 0.288 1.85 -- -- -- --
196.32 0.656 3.01 0.0751 0.167 -- -- -- 0.288 1.85 -- -- -- --
193.94 0.649 3.01 0.0293 -- -0.398 -- -- 0.294 -- 1.063 16 -- --
193.28 0.648 3.01 -- 0.105 -0.381 -- -- 0.289 23.4 1.1 16 -- --
198.01 0.658 3.01 0.0819 -- -- -- -- 0.292 -- -- -- -- --
196.47 0.656 3.01 -- 0.168 -- -- -- 0.28 1.86 -- -- -- --
193.97 0.649 3.01 -- -- -0.402 -- -- 0.29 -- 1.048 16 -- --
198.19 0.657 3.01 -- -- -- -- -- 0.283 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 179.84 radiation 1.0 14400 < th dose dependent rect. 3 1
2 179.86 atmosphere 1005.0 10 > th dose independent rect. 2 1
3 179.87 atmosphere 1005.0 10 > th dose dependent rect. 2 1
4 179.94 wind 3.0 10 < th dose independent rect. 2 1
8 180.10 temperature 30.0 30 < th dose dependent rect. 2 1
13 180.19 wind 1.0 30 > th dose independent rect. 2 1
14 180.19 wind 7.0 10 < th dose dependent rect. 2 1
18 180.20 temperature 10.0 30 > th dose independent rect. 2 1
20 180.20 temperature 30.0 30 < th dose independent rect. 2 1
21 180.20 humidity 50.0 30 > th dose independent rect. 2 1
24 180.20 atmosphere 995.0 30 > th dose independent rect. 2 1
25 180.20 atmosphere 1010.0 30 < th dose independent rect. 2 1
27 180.20 radiation 1.0 30 < th dose independent rect. 2 1
32 180.20 precipitation 0.1 30 < th dose independent rect. 2 1
33 180.20 temperature 10.0 30 > th dose independent rect. 3 23
35 180.20 radiation 1.0 30 < th dose dependent rect. 2 1
40 180.20 precipitation 0.1 30 < th dose dependent rect. 2 1
50 180.28 temperature 10.0 10 > th dose dependent rect. 2 1
51 180.29 atmosphere 1015.0 30 < th dose dependent rect. 2 1
53 180.31 humidity 50.0 30 > th dose dependent rect. 2 1
106 180.88 wind 9.0 1440 < th dose independent rect. 3 1
107 180.88 temperature 10.0 1440 > th dose independent rect. 3 1
110 180.88 temperature 30.0 1440 < th dose independent rect. 3 1
114 180.88 humidity 50.0 1440 > th dose independent rect. 3 1
123 180.88 atmosphere 995.0 1440 > th dose independent rect. 3 1
124 180.88 radiation 1.0 1440 < th dose independent rect. 3 1
144 180.88 temperature 10.0 1440 > th dose independent rect. 4 23
157 181.41 atmosphere 995.0 30 > th dose independent rect. 3 23
162 181.54 wind 9.0 30 < th dose independent rect. 3 23
171 182.50 precipitation 0.1 30 < th dose independent rect. 3 23
172 182.50 precipitation 0.1 30 < th dose dependent rect. 3 23
183 184.54 humidity 50.0 10 > th dose independent rect. 3 23
197 187.20 atmosphere 1015.0 30 < th dose independent rect. 3 23
198 187.26 wind 9.0 720 < th dose independent rect. 3 8
199 187.34 temperature 25.0 1440 > th dose independent rect. 2 1
203 187.41 temperature 25.0 1440 > th dose dependent rect. 1 1
208 187.72 temperature 30.0 30 < th dose independent rect. 3 23
209 187.87 atmosphere 995.0 720 > th dose independent rect. 11 16
211 187.91 temperature 10.0 720 > th dose independent rect. 3 8
212 187.91 atmosphere 995.0 720 > th dose independent rect. 3 8
213 187.91 temperature 10.0 720 > th dose independent rect. 11 16
215 187.94 atmosphere 995.0 720 > th dose independent rect. 23 16
216 187.94 humidity 80.0 720 > th dose dependent rect. 12 1
218 187.99 atmosphere 995.0 720 > th dose independent rect. 15 8
219 188.03 temperature 10.0 720 > th dose independent rect. 15 8
220 188.03 temperature 10.0 720 > th dose independent rect. 23 16
221 188.12 humidity 50.0 720 > th dose independent rect. 3 8
222 188.13 temperature 10.0 30 > th dose dependent rect. 3 23
226 188.29 wind 1.0 10 > th dose independent rect. 24 11
229 188.38 temperature 25.0 1440 < th dose independent rect. 1 2
230 188.44 precipitation 0.1 720 < th dose independent rect. 3 8
231 188.44 precipitation 0.1 720 < th dose dependent rect. 3 8
236 188.61 humidity 80.0 720 > th dose independent rect. 12 1
254 189.13 wind 1.0 10 > th dose independent rect. 21 23
257 189.30 precipitation 0.1 720 < th dose independent rect. 23 16
258 189.30 precipitation 0.1 720 < th dose dependent rect. 23 16
259 189.33 atmosphere 1015.0 720 < th dose independent rect. 3 8
261 189.34 temperature 25.0 90 > th dose dependent rect. 1 5
263 189.35 wind 1.0 30 > th dose independent rect. 12 23
268 189.46 wind 9.0 30 < th dose dependent rect. 3 23
269 189.52 wind 1.0 10 > th dose independent rect. 24 20
283 189.79 temperature 10.0 90 > th dose dependent rect. 3 16
291 189.91 wind 1.0 30 > th dose independent rect. 3 23
297 190.00 temperature 30.0 720 < th dose independent rect. 3 8
300 190.03 humidity 90.0 90 < th dose independent rect. 1 2
303 190.05 precipitation 0.1 720 < th dose independent rect. 15 8
304 190.05 precipitation 0.1 720 < th dose dependent rect. 15 8
316 190.22 atmosphere 1015.0 720 < th dose independent rect. 3 16
323 190.29 wind 9.0 720 < th dose independent rect. 19 8
326 190.31 radiation 10.0 10 < th dose dependent rect. 3 23
356 190.39 precipitation 0.1 720 < th dose independent rect. 11 16
358 190.39 precipitation 0.1 720 < th dose dependent rect. 11 16
365 190.48 precipitation 0.1 720 < th dose independent rect. 19 8
366 190.48 precipitation 0.1 720 < th dose dependent rect. 19 8
367 190.49 temperature 10.0 720 > th dose independent rect. 19 8
368 190.49 temperature 30.0 720 < th dose independent rect. 19 8
369 190.49 humidity 50.0 720 > th dose independent rect. 19 8
370 190.49 atmosphere 995.0 720 > th dose independent rect. 19 8
371 190.49 radiation 1.0 720 < th dose independent rect. 19 8
376 190.49 temperature 10.0 720 > th dose independent rect. 3 16
378 190.49 radiation 1.0 720 < th dose dependent rect. 19 8
383 190.50 wind 7.0 90 < th dose independent rect. 3 16
384 190.50 precipitation 0.1 720 < th dose independent rect. 3 16
385 190.50 precipitation 0.1 720 < th dose dependent rect. 3 16
386 190.51 wind 3.0 720 < th dose independent rect. 1 2
388 190.51 wind 1.0 720 > th dose independent rect. 15 8
397 190.56 temperature 10.0 720 > th dose independent rect. 7 8
398 190.56 atmosphere 1015.0 720 < th dose independent rect. 7 8
399 190.56 temperature 10.0 720 > th dose independent rect. 15 16
402 190.59 temperature 25.0 10 > th dose independent rect. 23 21
429 190.78 precipitation 0.1 720 < th dose independent rect. 7 8
431 190.78 precipitation 0.1 720 < th dose dependent rect. 7 8
434 190.79 wind 9.0 720 < th dose dependent rect. 1 2
439 190.84 wind 1.0 10 > th dose independent rect. 14 16
467 190.89 atmosphere 995.0 30 > th dose dependent rect. 11 16
469 190.92 wind 9.0 720 < th dose independent rect. 23 16
475 190.96 wind 1.0 10 > th dose independent rect. 23 23
485 191.00 temperature 15.0 30 > th dose independent rect. 11 16
486 191.01 wind 5.0 10 < th dose dependent rect. 19 8
492 191.05 wind 9.0 30 < th dose independent rect. 3 8
493 191.05 temperature 10.0 30 > th dose independent rect. 3 8
495 191.05 humidity 50.0 30 > th dose independent rect. 3 8
496 191.05 atmosphere 995.0 30 > th dose independent rect. 3 8
497 191.05 atmosphere 1015.0 30 < th dose independent rect. 3 8
500 191.06 wind 1.0 90 < th dose dependent rect. 20 1
504 191.07 wind 1.0 30 > th dose independent rect. 3 8
514 191.12 precipitation 0.1 30 < th dose independent rect. 3 8
516 191.12 precipitation 0.1 30 < th dose dependent rect. 3 8
525 191.17 precipitation 0.1 30 < th dose independent rect. 11 16
526 191.17 precipitation 0.1 30 < th dose dependent rect. 11 16
527 191.20 temperature 10.0 30 > th dose dependent rect. 3 8
530 191.22 atmosphere 995.0 30 > th dose independent rect. 11 16
532 191.24 atmosphere 995.0 720 > th dose independent rect. 15 16
533 191.24 wind 1.0 10 > th dose independent rect. 16 19
535 191.24 temperature 25.0 30 > th dose dependent rect. 20 3
538 191.26 temperature 30.0 30 < th dose independent rect. 11 16
541 191.27 atmosphere 995.0 720 > th dose independent rect. 7 8
542 191.27 wind 1.0 10 > th dose independent rect. 16 14
545 191.27 humidity 60.0 30 > th dose dependent rect. 19 8
551 191.31 temperature 25.0 30 > th dose independent rect. 20 3
552 191.31 atmosphere 995.0 720 > th dose independent rect. 3 16
555 191.32 atmosphere 995.0 30 > th dose dependent rect. 3 8
557 191.33 wind 9.0 30 < th dose dependent rect. 3 8
558 191.34 wind 1.0 10 > th dose independent rect. 21 14
559 191.34 wind 9.0 30 < th dose independent rect. 11 16
563 191.36 temperature 30.0 30 < th dose independent rect. 3 8
574 191.40 temperature 25.0 270 < th dose independent rect. 18 13
576 191.40 humidity 50.0 30 > th dose dependent rect. 11 16
578 191.42 wind 1.0 10 > th dose independent sin 12 NA
580 191.42 atmosphere 995.0 30 > th dose dependent rect. 11 1
583 191.43 wind 5.0 30 < th dose independent rect. 19 8
605 191.46 humidity 50.0 30 > th dose independent rect. 11 16
609 191.47 wind 1.0 30 < th dose independent rect. 6 21
611 191.49 temperature 25.0 270 > th dose independent rect. 22 5
627 191.52 temperature 25.0 270 > th dose independent rect. 23 3
631 191.53 atmosphere 1005.0 30 > th dose independent rect. 11 1
632 191.53 temperature 30.0 720 < th dose independent rect. 15 6
638 191.55 temperature 15.0 90 > th dose independent rect. 3 16
642 191.57 atmosphere 1010.0 10 < th dose independent rect. 6 1
651 191.58 temperature 30.0 720 < th dose independent rect. 15 12
652 191.58 wind 3.0 90 < th dose independent rect. 3 22
659 191.60 radiation 40.0 30 < th dose independent rect. 3 8
664 191.61 atmosphere 1010.0 90 < th dose independent rect. 3 16
666 191.61 wind 9.0 30 < th dose dependent rect. 3 16
673 191.63 wind 9.0 720 < th dose independent rect. 7 8
676 191.64 atmosphere 1000.0 720 > th dose independent rect. 13 2
678 191.64 atmosphere 1010.0 30 < th dose dependent rect. 6 1
681 191.65 temperature 10.0 30 > th dose dependent rect. 20 7
686 191.67 wind 1.0 90 > th dose independent rect. 3 16
690 191.68 wind 3.0 4320 > th dose independent rect. 1 1
699 191.70 atmosphere 1005.0 30 > th dose dependent rect. 11 12
714 191.72 wind 3.0 4320 < th dose independent rect. 1 1
715 191.72 temperature 25.0 10 > th dose independent rect. 12 23
718 191.74 humidity 80.0 90 > th dose independent rect. 18 9
719 191.74 humidity 80.0 90 > th dose independent rect. 10 17
723 191.75 radiation 1.0 90 < th dose dependent rect. 15 12
724 191.75 wind 3.0 90 < th dose dependent rect. 3 22
725 191.76 temperature 25.0 1440 > th dose independent rect. 4 1
735 191.78 wind 1.0 10 > th dose independent rect. 24 6
741 191.79 humidity 50.0 720 > th dose independent rect. 15 22
746 191.80 temperature 15.0 10 > th dose independent rect. 11 13
748 191.80 temperature 20.0 90 < th dose dependent rect. 10 12
754 191.82 wind 9.0 720 < th dose independent rect. 15 8
760 191.83 temperature 25.0 270 > th dose independent rect. 22 8
761 191.83 radiation 1.0 90 < th dose independent rect. 15 12
775 191.86 humidity 80.0 4320 < th dose dependent rect. 1 1
778 191.86 wind 5.0 10 < th dose dependent rect. 15 12
792 191.89 radiation 1.0 90 < th dose dependent rect. 10 17
805 191.92 precipitation 0.1 10 < th dose independent rect. 11 13
806 191.92 radiation 10.0 14400 < th dose dependent rect. 23 1
808 191.92 precipitation 0.1 10 < th dose dependent rect. 11 13
816 191.94 humidity 70.0 4320 > th dose independent rect. 21 1
817 191.94 atmosphere 1015.0 10 < th dose independent rect. 24 11
819 191.95 humidity 50.0 720 > th dose independent rect. 15 6
823 191.95 atmosphere 1015.0 30 < th dose independent rect. 11 16
832 191.97 wind 9.0 10 < th dose independent rect. 24 11
833 191.97 temperature 10.0 10 > th dose independent rect. 24 11
834 191.97 humidity 50.0 10 > th dose independent rect. 24 11
835 191.97 atmosphere 995.0 10 > th dose independent rect. 24 11
836 191.97 temperature 25.0 270 > th dose independent rect. 18 12
840 191.98 temperature 30.0 10 < th dose independent rect. 11 1
841 191.98 temperature 25.0 90 > th dose independent rect. 1 5
846 191.98 radiation 1.0 90 < th dose independent rect. 10 17
854 191.99 temperature 25.0 1440 > th dose dependent rect. 4 2
858 192.00 humidity 80.0 1440 < th dose independent rect. 19 1
864 192.00 temperature 25.0 270 > th dose dependent rect. 23 8
868 192.01 temperature 10.0 90 > th dose independent rect. 19 8
869 192.01 temperature 30.0 90 < th dose independent rect. 19 8
870 192.01 humidity 50.0 90 > th dose independent rect. 19 8
872 192.01 atmosphere 995.0 90 > th dose independent rect. 19 8
873 192.01 radiation 1.0 90 < th dose independent rect. 19 8
884 192.01 radiation 1.0 90 < th dose dependent rect. 19 8
891 192.03 temperature 25.0 270 > th dose independent rect. 18 9
895 192.03 wind 9.0 720 < th dose independent rect. 15 16
906 192.04 wind 1.0 30 > th dose dependent rect. 11 1
907 192.04 temperature 30.0 270 < th dose dependent rect. 8 13
908 192.04 temperature 30.0 90 < th dose dependent rect. 10 13
909 192.04 wind 5.0 10 < th dose dependent rect. 11 16
910 192.04 radiation 20.0 270 < th dose dependent rect. 8 19
914 192.05 radiation 10.0 10 < th dose independent rect. 3 23
920 192.06 temperature 30.0 720 < th dose independent rect. 15 8
922 192.06 temperature 25.0 10 > th dose independent rect. 23 12
932 192.07 precipitation 0.1 90 < th dose independent rect. 3 16
938 192.07 atmosphere 995.0 90 > th dose dependent rect. 19 8
940 192.07 precipitation 0.1 90 < th dose dependent rect. 3 16
943 192.08 precipitation 0.1 90 < th dose independent rect. 19 8
945 192.08 precipitation 0.1 90 < th dose dependent rect. 19 8
946 192.08 radiation 1.0 90 < th dose dependent rect. 17 10
953 192.09 temperature 10.0 1440 > th dose independent rect. 1 11
958 192.09 atmosphere 995.0 1440 > th dose independent rect. 1 11
959 192.09 temperature 10.0 1440 > th dose independent rect. 12 13
968 192.09 radiation 1.0 4320 < th dose dependent rect. 1 2
970 192.09 wind 9.0 30 < th dose dependent rect. 11 16
979 192.11 radiation 10.0 270 > th dose independent rect. 12 21
986 192.11 humidity 50.0 90 > th dose dependent rect. 19 17
998 192.13 radiation 20.0 720 > th dose independent rect. 16 1