Os11g0134500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os11g0134500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86 | 0.436 | 11.1 | -0.0543 | 1.09 | 0.69 | 0.546 | 0.0323 | -0.164 | 15.7 | 20.4 | 1203 | -- | -- |
| 85.99 | 0.432 | 11.1 | -0.0618 | 1.09 | 0.694 | 0.553 | -- | -0.167 | 15.8 | 20.42 | 1232 | -- | -- |
| 86.85 | 0.434 | 11.1 | -0.0704 | 1.09 | 0.691 | -- | -0.0583 | -0.169 | 15.7 | 20.49 | 1196 | -- | -- |
| 86.86 | 0.434 | 11.1 | -0.057 | 1.09 | 0.699 | -- | -- | -0.165 | 15.7 | 20.4 | 1196 | -- | -- |
| 139.71 | 0.551 | 11.1 | -0.0497 | -- | 0.659 | -- | -0.204 | -0.191 | -- | 20.4 | 140 | -- | -- |
| 97.03 | 0.462 | 11.1 | 0.22 | 1.05 | -- | 0.701 | -- | -0.0123 | 15.9 | -- | -- | -- | -- |
| 98.45 | 0.465 | 11.1 | 0.229 | 1.05 | -- | -- | -- | -0.00839 | 15.8 | -- | -- | -- | -- |
| 111.29 | 0.491 | 11.1 | 0.0188 | -- | 0.814 | -- | -- | -0.137 | -- | 28.16 | 134 | -- | -- |
| 86.94 | 0.434 | 11.1 | -- | 1.1 | 0.684 | -- | -- | -0.161 | 15.7 | 20.4 | 1173 | -- | -- |
| 159.19 | 0.59 | 11.1 | 0.186 | -- | -- | -- | -- | -0.0364 | -- | -- | -- | -- | -- |
| 99.83 | 0.467 | 11.1 | -- | 1.05 | -- | -- | -- | -0.0339 | 15.8 | -- | -- | -- | -- |
| 111.1 | 0.491 | 11.1 | -- | -- | 0.831 | -- | -- | -0.124 | -- | 28.08 | 146 | -- | -- |
| 160.1 | 0.591 | 11.1 | -- | -- | -- | -- | -- | -0.057 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.33 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 2 | 74.56 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 10 | 75.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 11 | 75.67 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 16 | 76.00 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 20 | 76.21 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 49 | 77.06 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 17 |
| 75 | 77.90 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 87 | 78.07 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 99 | 78.21 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 146 | 79.08 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 19 |
| 262 | 80.41 | humidity | 90.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 295 | 80.71 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 379 | 81.27 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 24 | 14 |
| 383 | 81.30 | temperature | 10.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 402 | 81.40 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 405 | 81.44 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 6 |
| 445 | 81.66 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 448 | 81.69 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 21 |
| 455 | 81.72 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 458 | 81.73 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 459 | 81.73 | humidity | 90.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 476 | 81.78 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 481 | 81.80 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 493 | 81.85 | radiation | 1.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 496 | 81.86 | temperature | 20.0 | 90 | > th | dose independent | rect. | 8 | 19 |
| 497 | 81.86 | radiation | 40.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 502 | 81.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 522 | 81.95 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 6 |
| 524 | 81.95 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 6 |
| 529 | 81.96 | temperature | 10.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 531 | 81.96 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 6 |
| 532 | 81.96 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 533 | 81.96 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 6 |
| 534 | 81.96 | temperature | 10.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 536 | 81.96 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 546 | 82.01 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 6 |
| 549 | 82.02 | temperature | 30.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 552 | 82.03 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 15 |
| 567 | 82.09 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 572 | 82.11 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 598 | 82.17 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 618 | 82.22 | wind | 7.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 637 | 82.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 6 |
| 641 | 82.28 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 18 |
| 665 | 82.32 | wind | 9.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 666 | 82.32 | humidity | 50.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 670 | 82.33 | wind | 1.0 | 30 | > th | dose independent | rect. | 9 | 6 |
| 687 | 82.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 717 | 82.45 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 718 | 82.45 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 750 | 82.52 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 15 | 18 |
| 753 | 82.52 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 15 | 18 |
| 755 | 82.53 | radiation | 40.0 | 10 | < th | dose independent | rect. | 15 | 18 |
| 763 | 82.55 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 766 | 82.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 767 | 82.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 768 | 82.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 797 | 82.66 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 804 | 82.70 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 815 | 82.72 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 843 | 82.79 | temperature | 25.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 885 | 82.89 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 919 | 82.96 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 21 |
| 929 | 82.99 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 955 | 83.07 | wind | 1.0 | 270 | > th | dose independent | rect. | 9 | 1 |
| 964 | 83.09 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 971 | 83.11 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 15 | 18 |