Os11g0134400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Calmodulin 6 (CaM 6).
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Os11g0134400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Calmodulin 6 (CaM 6).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 246.15 | 0.737 | 6.81 | -2.48 | 2.11 | -2.76 | -0.324 | 0.684 | -1.26 | 7.78 | 93.02 | 653 | 13.3 | -- |
| 246.41 | 0.731 | 6.81 | -2.47 | 2.1 | -2.69 | -0.178 | -- | -1.24 | 7.77 | 93 | 665 | 13.3 | -- |
| 246.39 | 0.731 | 6.81 | -2.49 | 2.11 | -2.78 | -- | 0.599 | -1.26 | 7.78 | 93 | 655 | 13.3 | -- |
| 246.51 | 0.731 | 6.81 | -2.46 | 2.09 | -2.69 | -- | -- | -1.24 | 7.78 | 93 | 670 | 13.4 | -- |
| 475.33 | 1.02 | 6.85 | -2.48 | -- | -2.35 | -- | 1.12 | -1.16 | -- | 93 | 523 | 13.5 | -- |
| 308.26 | 0.823 | 6.78 | -2.54 | 1.92 | -- | -0.299 | -- | -1.07 | 8.09 | -- | -- | -- | -- |
| 308.53 | 0.823 | 6.78 | -2.55 | 1.92 | -- | -- | -- | -1.07 | 8.08 | -- | -- | -- | -- |
| 476.44 | 1.02 | 6.85 | -2.46 | -- | -2.27 | -- | -- | -1.17 | -- | 93 | 525 | 13.6 | -- |
| 403.61 | 0.936 | 6.77 | -- | 2.09 | -2.9 | -- | -- | -1 | 7.83 | 93 | 694 | 13.8 | -- |
| 510.59 | 1.06 | 6.82 | -2.54 | -- | -- | -- | -- | -1.05 | -- | -- | -- | -- | -- |
| 480.4 | 1.03 | 6.71 | -- | 1.9 | -- | -- | -- | -0.787 | 8.18 | -- | -- | -- | -- |
| 633.45 | 1.17 | 6.8 | -- | -- | -2.62 | -- | -- | -0.903 | -- | 93 | 520 | 13.7 | -- |
| 680.3 | 1.22 | 6.76 | -- | -- | -- | -- | -- | -0.766 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 247.71 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 5 |
| 8 | 250.81 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 10 | 250.95 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 13 | 251.66 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 18 | 252.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 7 |
| 24 | 252.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 7 |
| 30 | 252.97 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 8 |
| 39 | 253.81 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 45 | 254.29 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 53 | 255.18 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 61 | 255.84 | humidity | 90.0 | 720 | < th | dose independent | rect. | 18 | 6 |
| 62 | 255.86 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 14 | 11 |
| 68 | 256.07 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 70 | 256.09 | humidity | 80.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 74 | 256.50 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 13 |
| 80 | 256.77 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 85 | 256.93 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 4 |
| 89 | 257.18 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 16 |
| 135 | 259.23 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 149 | 259.61 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 180 | 260.87 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 201 | 261.66 | humidity | 90.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 208 | 261.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 218 | 262.15 | precipitation | 0.1 | 720 | < th | dose independent | sin | 10 | NA |
| 219 | 262.15 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 10 | NA |
| 220 | 262.16 | precipitation | 0.1 | 270 | < th | dose independent | sin | 8 | NA |
| 222 | 262.16 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 8 | NA |
| 223 | 262.18 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 255 | 262.96 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 258 | 263.09 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 262 | 263.16 | precipitation | 0.1 | 720 | < th | dose independent | sin | 12 | NA |
| 263 | 263.16 | precipitation | 0.1 | 720 | < th | dose dependent | sin | 12 | NA |
| 271 | 263.34 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 285 | 263.73 | humidity | 90.0 | 720 | < th | dose independent | rect. | 11 | 13 |
| 298 | 263.96 | humidity | 90.0 | 720 | < th | dose independent | sin | 16 | NA |
| 309 | 264.22 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 20 |
| 310 | 264.30 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 311 | 264.33 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 13 |
| 314 | 264.39 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 18 | 13 |
| 335 | 264.67 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 356 | 264.88 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 359 | 264.94 | humidity | 80.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 366 | 264.98 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 369 | 264.99 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 381 | 265.07 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 389 | 265.16 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 396 | 265.19 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 402 | 265.24 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 407 | 265.28 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 408 | 265.29 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 445 | 265.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 458 | 265.68 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 19 | 18 |
| 464 | 265.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 495 | 265.85 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 4 |
| 536 | 265.99 | radiation | 1.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 537 | 265.99 | precipitation | 0.1 | 720 | > th | dose independent | sin | 10 | NA |
| 565 | 266.07 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 579 | 266.13 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 617 | 266.36 | humidity | 90.0 | 720 | > th | dose independent | rect. | 18 | 6 |
| 627 | 266.41 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 630 | 266.43 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 16 |
| 659 | 266.58 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 11 |
| 676 | 266.63 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 18 |
| 710 | 266.72 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 16 |
| 741 | 266.86 | humidity | 70.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 782 | 267.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 809 | 267.25 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 820 | 267.29 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 833 | 267.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 878 | 267.51 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 885 | 267.56 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 895 | 267.60 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 904 | 267.64 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 927 | 267.71 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 8 |
| 929 | 267.72 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 932 | 267.73 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 962 | 267.86 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 971 | 267.89 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 981 | 267.93 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 8 |