Os11g0133900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0133900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.92 | 0.257 | 9.37 | 0.126 | 0.22 | -0.47 | -0.429 | -0.855 | -0.0573 | 16.5 | 61.33 | 10 | -- | -- |
| 31.51 | 0.261 | 9.37 | 0.0979 | 0.242 | -0.472 | 0.115 | -- | -0.0591 | 16.1 | 58.95 | 2 | -- | -- |
| 30.15 | 0.258 | 9.37 | 0.121 | 0.231 | -0.458 | -- | -0.663 | -0.0596 | 16.4 | 61.33 | 10 | -- | -- |
| 31.53 | 0.262 | 9.37 | 0.0953 | 0.233 | -0.492 | -- | -- | -0.0579 | 16.5 | 59 | 2 | -- | -- |
| 31.74 | 0.264 | 9.37 | 0.118 | -- | -0.615 | -- | -0.665 | -0.0719 | -- | 61.33 | 10 | -- | -- |
| 35.75 | 0.28 | 9.37 | 0.0888 | 0.554 | -- | 0.362 | -- | -0.0382 | 15.1 | -- | -- | -- | -- |
| 36.17 | 0.282 | 9.37 | 0.0964 | 0.557 | -- | -- | -- | -0.0359 | 15.2 | -- | -- | -- | -- |
| 32.72 | 0.266 | 9.37 | 0.104 | -- | -0.592 | -- | -- | -0.0872 | -- | 69.53 | 51 | -- | -- |
| 31.78 | 0.263 | 9.37 | -- | 0.231 | -0.491 | -- | -- | -0.0687 | 16.5 | 59 | 2 | -- | -- |
| 53.77 | 0.343 | 9.37 | 0.0728 | -- | -- | -- | -- | -0.0505 | -- | -- | -- | -- | -- |
| 36.41 | 0.282 | 9.37 | -- | 0.555 | -- | -- | -- | -0.0466 | 15.2 | -- | -- | -- | -- |
| 32.97 | 0.267 | 9.38 | -- | -- | -0.588 | -- | -- | -0.102 | -- | 69.52 | 46 | -- | -- |
| 53.91 | 0.343 | 9.37 | -- | -- | -- | -- | -- | -0.0586 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 29.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 12 | 29.73 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 2 | 16 |
| 17 | 29.80 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 20 | 29.83 | humidity | 60 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 26 | 29.93 | humidity | 60 | 10 | > th | dose dependent | no | NA | NA |
| 29 | 29.94 | humidity | 70 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 33 | 29.97 | humidity | 70 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 34 | 29.97 | humidity | 70 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 45 | 30.02 | humidity | 70 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 64 | 30.11 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 65 | 30.12 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 14 |
| 66 | 30.12 | humidity | 70 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 82 | 30.19 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 89 | 30.21 | humidity | 70 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 92 | 30.24 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 104 | 30.28 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 12 | 21 |
| 105 | 30.28 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 17 |
| 108 | 30.29 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 21 |
| 132 | 30.34 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 10 | 22 |
| 139 | 30.35 | humidity | 70 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 141 | 30.36 | atmosphere | 1010 | 10 | < th | dose dependent | rect. | 7 | 21 |
| 145 | 30.38 | humidity | 80 | 10 | > th | dose dependent | sin | 23 | NA |
| 159 | 30.41 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 22 |
| 166 | 30.42 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 17 |
| 243 | 30.53 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 22 |
| 250 | 30.54 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 2 | 22 |
| 251 | 30.54 | temperature | 20 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 268 | 30.57 | humidity | 80 | 10 | > th | dose independent | rect. | 21 | 23 |
| 269 | 30.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 299 | 30.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 335 | 30.66 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 347 | 30.68 | temperature | 20 | 30 | > th | dose dependent | no | NA | NA |
| 400 | 30.75 | humidity | 80 | 10 | > th | dose independent | rect. | 17 | 23 |
| 407 | 30.76 | humidity | 80 | 10 | > th | dose independent | no | NA | NA |
| 411 | 30.76 | humidity | 80 | 10 | > th | dose independent | rect. | 15 | 23 |
| 420 | 30.77 | humidity | 80 | 10 | > th | dose independent | rect. | 13 | 23 |
| 426 | 30.77 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 431 | 30.78 | humidity | 80 | 10 | > th | dose independent | rect. | 5 | 15 |
| 437 | 30.78 | humidity | 80 | 10 | > th | dose independent | rect. | 9 | 23 |
| 438 | 30.78 | humidity | 80 | 10 | > th | dose independent | rect. | 11 | 23 |
| 439 | 30.78 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 22 | 23 |
| 454 | 30.80 | temperature | 25 | 30 | > th | dose independent | rect. | 19 | 23 |
| 455 | 30.80 | humidity | 80 | 10 | > th | dose independent | rect. | 19 | 23 |
| 460 | 30.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 466 | 30.81 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 11 |
| 491 | 30.83 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 19 | 19 |
| 496 | 30.83 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 11 | 22 |
| 528 | 30.86 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 540 | 30.87 | temperature | 15 | 30 | > th | dose dependent | sin | 2 | NA |
| 546 | 30.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 578 | 30.91 | humidity | 80 | 10 | < th | dose independent | rect. | 7 | 11 |
| 595 | 30.91 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 4 |
| 618 | 30.92 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 620 | 30.92 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 646 | 30.94 | humidity | 80 | 10 | > th | dose independent | sin | 23 | NA |
| 660 | 30.95 | atmosphere | 1005 | 270 | > th | dose independent | no | NA | NA |
| 664 | 30.95 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 4 | 22 |
| 689 | 30.96 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 21 | 21 |
| 714 | 30.97 | humidity | 90 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 747 | 31.00 | humidity | 80 | 10 | < th | dose independent | sin | 0 | NA |
| 760 | 31.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 21 |
| 770 | 31.01 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 17 | 23 |
| 775 | 31.01 | humidity | 70 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 812 | 31.03 | temperature | 25 | 30 | < th | dose independent | rect. | 22 | 23 |
| 813 | 31.03 | humidity | 80 | 30 | < th | dose independent | rect. | 19 | 23 |
| 845 | 31.05 | humidity | 80 | 10 | < th | dose independent | rect. | 4 | 14 |
| 863 | 31.06 | atmosphere | 1005 | 10 | > th | dose independent | no | NA | NA |
| 902 | 31.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 920 | 31.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 11 |
| 924 | 31.08 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 938 | 31.09 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 23 |
| 956 | 31.10 | temperature | 25 | 30 | < th | dose independent | rect. | 11 | 23 |
| 957 | 31.10 | temperature | 25 | 30 | < th | dose independent | rect. | 13 | 23 |
| 971 | 31.11 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 15 | 21 |
| 984 | 31.12 | temperature | 25 | 30 | < th | dose independent | no | NA | NA |
| 989 | 31.12 | temperature | 25 | 30 | < th | dose independent | rect. | 12 | 20 |
| 997 | 31.12 | temperature | 25 | 30 | > th | dose independent | rect. | 13 | 23 |
| 998 | 31.12 | temperature | 25 | 30 | < th | dose independent | rect. | 15 | 23 |