Os11g0133800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, DHHC-type domain containing protein.
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Os11g0133800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, DHHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 410.8 | 0.952 | 4.3 | -1.02 | 0.717 | 3.3 | -0.684 | 1.08 | 0.415 | 19.3 | 5.804 | 2298 | -- | -- |
| 411.06 | 0.944 | 4.29 | -1.05 | 0.708 | 3.14 | -0.621 | -- | 0.423 | 19.3 | 5.822 | 2262 | -- | -- |
| 411.84 | 0.945 | 4.3 | -0.998 | 0.7 | 3.35 | -- | 1.04 | 0.417 | 19.2 | 5.889 | 2255 | -- | -- |
| 412.07 | 0.945 | 4.28 | -1.04 | 0.704 | 3.16 | -- | -- | 0.424 | 19.3 | 5.825 | 2255 | -- | -- |
| 436.16 | 0.973 | 4.28 | -0.975 | -- | 3.62 | -- | 1.15 | 0.417 | -- | 5.8 | 2150 | -- | -- |
| 525.64 | 1.07 | 4.33 | -1.83 | 0.888 | -- | -1.13 | -- | 0.235 | 20.4 | -- | -- | -- | -- |
| 529.68 | 1.08 | 4.33 | -1.8 | 0.894 | -- | -- | -- | 0.235 | 20.3 | -- | -- | -- | -- |
| 436.37 | 0.973 | 4.26 | -0.985 | -- | 3.57 | -- | -- | 0.471 | -- | 5.8 | 2015 | -- | -- |
| 436.61 | 0.973 | 4.25 | -- | 0.707 | 3.64 | -- | -- | 0.549 | 18.9 | 5.747 | 2299 | -- | -- |
| 573.97 | 1.12 | 4.31 | -1.8 | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
| 614.61 | 1.16 | 4.29 | -- | 0.903 | -- | -- | -- | 0.435 | 20.2 | -- | -- | -- | -- |
| 459.35 | 0.998 | 4.24 | -- | -- | 4 | -- | -- | 0.531 | -- | 5.783 | 1996 | -- | -- |
| 659.51 | 1.2 | 4.26 | -- | -- | -- | -- | -- | 0.426 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 423.90 | wind | 5 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 2 | 424.18 | wind | 5 | 1440 | > th | dose independent | rect. | 20 | 20 |
| 5 | 424.64 | wind | 5 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 7 | 424.76 | wind | 5 | 1440 | > th | dose independent | rect. | 15 | 20 |
| 17 | 425.38 | wind | 5 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 27 | 425.79 | wind | 5 | 1440 | > th | dose independent | rect. | 21 | 22 |
| 51 | 426.66 | wind | 5 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 65 | 426.99 | wind | 5 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 72 | 427.14 | wind | 5 | 1440 | > th | dose independent | no | NA | NA |
| 81 | 427.42 | wind | 5 | 1440 | < th | dose independent | no | NA | NA |
| 84 | 427.55 | wind | 5 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 86 | 427.71 | wind | 5 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 91 | 427.76 | wind | 5 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 95 | 427.83 | wind | 5 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 102 | 428.04 | wind | 5 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 103 | 428.07 | wind | 5 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 106 | 428.12 | wind | 5 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 123 | 428.42 | wind | 5 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 150 | 429.00 | wind | 9 | 4320 | < th | dose independent | rect. | 17 | 18 |
| 151 | 429.02 | wind | 5 | 1440 | > th | dose dependent | rect. | 17 | 17 |
| 167 | 429.36 | wind | 9 | 4320 | > th | dose independent | rect. | 17 | 18 |
| 168 | 429.37 | wind | 5 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 184 | 429.70 | wind | 9 | 4320 | > th | dose dependent | rect. | 16 | 19 |
| 196 | 429.95 | wind | 5 | 1440 | > th | dose independent | sin | 11 | NA |
| 213 | 430.25 | wind | 5 | 1440 | < th | dose independent | sin | 10 | NA |
| 332 | 432.57 | wind | 5 | 1440 | > th | dose dependent | sin | 10 | NA |
| 347 | 432.86 | wind | 9 | 4320 | > th | dose dependent | sin | 10 | NA |
| 362 | 433.18 | wind | 3 | 1440 | > th | dose dependent | rect. | 21 | 19 |
| 363 | 433.19 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 365 | 433.20 | wind | 5 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 370 | 433.26 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 377 | 433.38 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 382 | 433.42 | wind | 9 | 4320 | > th | dose independent | sin | 10 | NA |
| 409 | 433.85 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 441 | 434.24 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 448 | 434.33 | wind | 7 | 1440 | < th | dose dependent | rect. | 21 | 18 |
| 484 | 434.92 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 489 | 434.96 | wind | 7 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 517 | 435.24 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 518 | 435.24 | wind | 5 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 519 | 435.27 | wind | 9 | 4320 | < th | dose independent | sin | 10 | NA |
| 526 | 435.32 | wind | 1 | 1440 | > th | dose dependent | sin | 7 | NA |
| 529 | 435.33 | wind | 5 | 1440 | > th | dose dependent | no | NA | NA |
| 541 | 435.38 | wind | 1 | 1440 | > th | dose dependent | rect. | 21 | 16 |
| 552 | 435.46 | wind | 9 | 1440 | < th | dose dependent | sin | 7 | NA |
| 553 | 435.46 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 555 | 435.48 | wind | 7 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 571 | 435.59 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 584 | 435.70 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 596 | 435.80 | wind | 5 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 620 | 435.98 | wind | 5 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 644 | 436.11 | wind | 5 | 1440 | > th | dose dependent | rect. | 21 | 13 |
| 647 | 436.13 | wind | 5 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 689 | 436.49 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 712 | 436.62 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 7 |
| 728 | 436.70 | wind | 7 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 822 | 437.27 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 986 | 438.25 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 2 |