Os11g0131400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0131400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.31 | 0.463 | 7.16 | 2.1 | 2.94 | -0.526 | 0.848 | -0.176 | 0.249 | 18.5 | 3 | 2 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 107.75 | 0.487 | 7.18 | 2 | 2.91 | -- | 0.705 | -- | 0.163 | 18.7 | -- | -- | -- | -- |
| 109 | 0.489 | 7.18 | 1.98 | 2.91 | -- | -- | -- | 0.165 | 18.7 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 551.92 | 1.1 | 7.12 | 1.92 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 212.81 | 0.682 | 7.23 | -- | 2.89 | -- | -- | -- | -0.056 | 18.7 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 648.79 | 1.19 | 7.17 | -- | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 8 |
| 18 | 93.14 | temperature | 15 | 10 | > th | dose dependent | sin | 10 | NA |
| 19 | 93.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 8 |
| 34 | 94.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 39 | 94.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 13 |
| 43 | 94.39 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 13 |
| 56 | 94.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 2 |
| 61 | 94.77 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 13 |
| 77 | 95.01 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 6 |
| 82 | 95.09 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 12 |
| 90 | 95.19 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 10 |
| 96 | 95.22 | temperature | 25 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 116 | 95.31 | temperature | 20 | 30 | > th | dose independent | rect. | 16 | 17 |
| 128 | 95.41 | temperature | 25 | 10 | < th | dose dependent | sin | 10 | NA |
| 179 | 95.88 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 17 |
| 181 | 95.90 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 1 |
| 195 | 95.99 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 20 |
| 207 | 96.07 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 22 |
| 244 | 96.18 | temperature | 20 | 30 | > th | dose independent | sin | 10 | NA |
| 304 | 96.42 | temperature | 20 | 30 | < th | dose independent | rect. | 9 | 21 |
| 308 | 96.43 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 22 |
| 335 | 96.48 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 21 |
| 361 | 96.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 370 | 96.60 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 12 |
| 373 | 96.61 | temperature | 20 | 30 | < th | dose independent | rect. | 13 | 17 |
| 377 | 96.62 | temperature | 20 | 10 | < th | dose independent | rect. | 23 | 7 |
| 385 | 96.65 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 17 | 15 |
| 407 | 96.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 422 | 96.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 13 |
| 432 | 96.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 16 |
| 445 | 96.79 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 452 | 96.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 519 | 96.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 566 | 97.02 | temperature | 20 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 568 | 97.03 | temperature | 20 | 30 | > th | dose independent | rect. | 4 | 23 |
| 644 | 97.16 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 648 | 97.16 | temperature | 20 | 30 | < th | dose dependent | rect. | 15 | 20 |
| 721 | 97.31 | temperature | 20 | 30 | > th | dose independent | no | NA | NA |
| 724 | 97.32 | temperature | 20 | 10 | < th | dose independent | rect. | 20 | 23 |
| 732 | 97.33 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 17 |
| 762 | 97.37 | temperature | 20 | 30 | < th | dose independent | rect. | 5 | 23 |
| 773 | 97.38 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 22 |
| 774 | 97.39 | temperature | 20 | 30 | < th | dose independent | no | NA | NA |
| 784 | 97.40 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 23 |
| 797 | 97.42 | temperature | 20 | 30 | < th | dose independent | rect. | 15 | 23 |
| 801 | 97.43 | temperature | 20 | 30 | < th | dose independent | sin | 10 | NA |
| 811 | 97.44 | temperature | 20 | 30 | > th | dose independent | rect. | 13 | 23 |
| 825 | 97.46 | temperature | 20 | 30 | < th | dose independent | rect. | 3 | 23 |
| 835 | 97.47 | temperature | 20 | 30 | > th | dose independent | rect. | 15 | 21 |
| 846 | 97.48 | temperature | 20 | 30 | < th | dose independent | rect. | 1 | 23 |
| 937 | 97.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 15 |