Os11g0128700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mad3/BUB1 homology region 1 domain containing protein.
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Os11g0128700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mad3/BUB1 homology region 1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.46 | 0.452 | 5.91 | 0.0538 | 0.906 | 0.835 | -0.0842 | -1.19 | 0.0316 | 1.22 | 19.5 | 752 | -- | -- |
| 95.4 | 0.455 | 5.93 | -0.05 | 0.94 | 1.07 | 0.117 | -- | 0.0237 | 1.23 | 19.32 | 841 | -- | -- |
| 92.48 | 0.448 | 5.91 | 0.0513 | 0.905 | 0.839 | -- | -1.16 | 0.0312 | 1.2 | 19.48 | 747 | -- | -- |
| 95.41 | 0.455 | 5.94 | -0.0751 | 0.932 | 1.08 | -- | -- | 0.0116 | 1.2 | 19.3 | 841 | -- | -- |
| 139.14 | 0.552 | 5.93 | -0.131 | -- | 0.597 | -- | -0.884 | -0.0318 | -- | 19.48 | 747 | -- | -- |
| 117.02 | 0.507 | 5.98 | -0.463 | 0.827 | -- | 0.149 | -- | -0.178 | 1.53 | -- | -- | -- | -- |
| 117.11 | 0.507 | 5.98 | -0.468 | 0.827 | -- | -- | -- | -0.179 | 1.57 | -- | -- | -- | -- |
| 135.84 | 0.543 | 5.93 | -0.107 | -- | 0.998 | -- | -- | -0.00965 | -- | 19.5 | 292 | -- | -- |
| 95.56 | 0.455 | 5.94 | -- | 0.936 | 1.1 | -- | -- | 0.0153 | 1.21 | 19.32 | 841 | -- | -- |
| 158.99 | 0.589 | 5.97 | -0.435 | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
| 122.88 | 0.519 | 5.97 | -- | 0.819 | -- | -- | -- | -0.127 | 1.55 | -- | -- | -- | -- |
| 136.1 | 0.543 | 5.93 | -- | -- | 1.07 | -- | -- | -0.000498 | -- | 19.25 | 294 | -- | -- |
| 163.97 | 0.598 | 5.96 | -- | -- | -- | -- | -- | -0.112 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 15 |
| 10 | 85.56 | temperature | 10 | 90 | > th | dose dependent | sin | 3 | NA |
| 12 | 85.74 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 25 | 86.08 | temperature | 30 | 90 | < th | dose dependent | sin | 3 | NA |
| 37 | 86.54 | temperature | 30 | 10 | < th | dose dependent | sin | 2 | NA |
| 65 | 87.40 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 17 |
| 122 | 88.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 12 |
| 148 | 89.16 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 17 |
| 151 | 89.21 | temperature | 20 | 270 | > th | dose independent | sin | 2 | NA |
| 175 | 89.63 | temperature | 20 | 270 | < th | dose independent | sin | 3 | NA |
| 305 | 90.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 16 |
| 403 | 91.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 529 | 92.14 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 11 |
| 555 | 92.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 564 | 92.31 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 11 |
| 570 | 92.33 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 8 |
| 844 | 93.38 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 861 | 93.45 | temperature | 20 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 883 | 93.53 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 23 |
| 886 | 93.54 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 23 |
| 889 | 93.55 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 896 | 93.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 14 |
| 928 | 93.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 953 | 93.79 | temperature | 20 | 720 | < th | dose independent | rect. | 7 | 23 |
| 994 | 93.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 9 |