Os11g0128600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0128600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.95 | 0.46 | 8.1 | 0.328 | 0.101 | 1.06 | -0.624 | -1.21 | -0.155 | 21.4 | 24.4 | 4233 | -- | -- |
| 97.22 | 0.459 | 8.11 | 0.106 | 0.115 | 0.919 | -0.587 | -- | -0.108 | 20.5 | 23.3 | 7160 | -- | -- |
| 97.28 | 0.459 | 8.11 | 0.324 | 0.106 | 1.06 | -- | -1.13 | -0.163 | 22.7 | 24.49 | 4232 | -- | -- |
| 98.48 | 0.462 | 8.12 | 0.0673 | 0.0855 | 0.895 | -- | -- | -0.142 | 21.3 | 23.3 | 7164 | -- | -- |
| 97.95 | 0.461 | 8.1 | 0.339 | -- | 1.04 | -- | -1.12 | -0.156 | -- | 24.38 | 4270 | -- | -- |
| 124.33 | 0.523 | 8.21 | -0.439 | 0.0777 | -- | -0.697 | -- | -0.515 | 20.3 | -- | -- | -- | -- |
| 125.8 | 0.525 | 8.21 | -0.417 | 0.0855 | -- | -- | -- | -0.515 | 19.1 | -- | -- | -- | -- |
| 98.81 | 0.463 | 8.12 | 0.0497 | -- | 0.884 | -- | -- | -0.156 | -- | 23.53 | 7298 | -- | -- |
| 98.47 | 0.462 | 8.13 | -- | 0.0828 | 0.872 | -- | -- | -0.165 | 21.2 | 23.6 | 7298 | -- | -- |
| 126.18 | 0.525 | 8.2 | -0.419 | -- | -- | -- | -- | -0.516 | -- | -- | -- | -- | -- |
| 130.38 | 0.534 | 8.2 | -- | 0.0903 | -- | -- | -- | -0.468 | 18.8 | -- | -- | -- | -- |
| 98.87 | 0.463 | 8.12 | -- | -- | 0.867 | -- | -- | -0.167 | -- | 23.55 | 7298 | -- | -- |
| 130.81 | 0.534 | 8.19 | -- | -- | -- | -- | -- | -0.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.45 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 6 | 93.55 | temperature | 25 | 4320 | < th | dose independent | sin | 12 | NA |
| 9 | 93.69 | temperature | 25 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 10 | 93.70 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 16 |
| 12 | 93.72 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 24 | 93.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 14 |
| 25 | 93.90 | temperature | 25 | 4320 | > th | dose independent | sin | 13 | NA |
| 33 | 93.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 56 | 94.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 6 |
| 94 | 94.46 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 107 | 94.58 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 117 | 94.63 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 13 |
| 145 | 94.78 | temperature | 25 | 4320 | > th | dose dependent | sin | 9 | NA |
| 155 | 94.83 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 17 |
| 229 | 95.24 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 285 | 95.51 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 316 | 95.66 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 321 | 95.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 333 | 95.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 363 | 95.85 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 365 | 95.86 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 373 | 95.90 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 381 | 95.92 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 3 |
| 436 | 96.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 466 | 96.13 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 475 | 96.15 | temperature | 15 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 566 | 96.32 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 611 | 96.40 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 643 | 96.47 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 668 | 96.52 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 23 |
| 705 | 96.60 | temperature | 25 | 4320 | < th | dose independent | rect. | 4 | 23 |
| 737 | 96.65 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 743 | 96.65 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 23 |
| 750 | 96.66 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 21 |
| 753 | 96.66 | temperature | 25 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 764 | 96.69 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 795 | 96.71 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 800 | 96.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 23 |
| 801 | 96.73 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 818 | 96.75 | temperature | 25 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 823 | 96.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 6 |
| 847 | 96.79 | temperature | 25 | 4320 | > th | dose independent | rect. | 3 | 23 |
| 917 | 96.88 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 933 | 96.90 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 971 | 96.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 984 | 96.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 986 | 96.98 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 23 |