Os11g0128500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Myb factor.
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Os11g0128500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Myb factor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.79 | 0.651 | 4.57 | 0.596 | 0.036 | -1.18 | -0.385 | -0.286 | -0.201 | 21.1 | 22 | 934 | -- | -- |
| 191.73 | 0.645 | 4.56 | 0.695 | 0.00549 | -1.19 | -0.489 | -- | -0.175 | 20.9 | 22.1 | 1005 | -- | -- |
| 192.04 | 0.645 | 4.58 | 0.576 | 0.0101 | -1.19 | -- | -0.429 | -0.206 | 20.9 | 22.01 | 998 | -- | -- |
| 192.49 | 0.646 | 4.57 | 0.699 | 0.0327 | -1.19 | -- | -- | -0.179 | 0.674 | 22.1 | 978 | -- | -- |
| 192.05 | 0.645 | 4.58 | 0.577 | -- | -1.19 | -- | -0.426 | -0.206 | -- | 22.01 | 1000 | -- | -- |
| 247.55 | 0.738 | 4.65 | 0.274 | 0.165 | -- | 0.432 | -- | -0.562 | 9.96 | -- | -- | -- | -- |
| 248.24 | 0.738 | 4.65 | 0.292 | 0.163 | -- | -- | -- | -0.56 | 10.6 | -- | -- | -- | -- |
| 192.56 | 0.646 | 4.56 | 0.711 | -- | -1.19 | -- | -- | -0.175 | -- | 22.07 | 1004 | -- | -- |
| 203.38 | 0.664 | 4.59 | -- | 0.0419 | -1.01 | -- | -- | -0.291 | 0.315 | 22.2 | 852 | -- | -- |
| 249.88 | 0.739 | 4.65 | 0.289 | -- | -- | -- | -- | -0.561 | -- | -- | -- | -- | -- |
| 250.48 | 0.74 | 4.65 | -- | 0.162 | -- | -- | -- | -0.593 | 10.5 | -- | -- | -- | -- |
| 203.5 | 0.664 | 4.59 | -- | -- | -0.994 | -- | -- | -0.294 | -- | 22.24 | 846 | -- | -- |
| 252.08 | 0.741 | 4.66 | -- | -- | -- | -- | -- | -0.593 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.26 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 23 | 192.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 26 | 192.65 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 34 | 192.75 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 40 | 192.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 43 | 192.85 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 48 | 192.89 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 49 | 192.90 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 75 | 193.17 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 85 | 193.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 207 | 194.83 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 209 | 194.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 236 | 195.27 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 409 | 197.00 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 423 | 197.10 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 491 | 197.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 492 | 197.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 497 | 197.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 542 | 197.97 | temperature | 10.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 593 | 198.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 678 | 198.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 688 | 198.82 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 700 | 198.88 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 704 | 198.90 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 708 | 198.92 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 761 | 199.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 797 | 199.23 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 835 | 199.37 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 842 | 199.39 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 885 | 199.55 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 993 | 199.95 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 4 | 1 |