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Os11g0121600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.3 (0.0166) R2 : 0.667
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.13 (0.0396) R2dC : 0.595 R2C : 0.564
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.364 (0.0349) R2dN8 : 0.102 R2N8 : 0.072
σ : 0.313
deviance : 44.84
__
_____
C
peak time of C : 0.48
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.03 0.278 11.2 0.559 1.09 -0.36 -0.919 5.63 -0.345 0.376 30.25 1203 -- --
37.28 0.284 11.3 -0.314 1.1 0.28 -0.844 -- -0.327 0.44 31.28 2591 -- --
38.56 0.289 11.1 0.58 1.1 -0.376 -- 5.64 -0.342 0.403 31.2 1228 -- --
39.75 0.294 11.3 -0.331 1.09 0.259 -- -- -0.343 0.453 31.18 1202 -- --
111.38 0.492 11.1 0.493 -- -0.142 -- 5.51 -0.3 -- 31.6 1103 -- --
39.95 0.296 11.3 -0.303 1.13 -- -0.829 -- -0.398 0.448 -- -- -- --
42.9 0.307 11.3 -0.271 1.13 -- -- -- -0.394 0.492 -- -- -- --
109.31 0.489 11.2 -0.131 -- -0.775 -- -- -0.336 -- 25.44 1022 -- --
42.67 0.304 11.3 -- 1.1 0.213 -- -- -0.35 0.421 32.4 1200 -- --
123.33 0.519 11.2 -0.232 -- -- -- -- -0.375 -- -- -- -- --
44.84 0.313 11.3 -- 1.13 -- -- -- -0.364 0.48 -- -- -- --
108.27 0.485 11.3 -- -- 0.706 -- -- -0.417 -- 24.2 999 -- --
124.76 0.521 11.2 -- -- -- -- -- -0.35 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.73 atmosphere 1000.0 270 > th dose independent rect. 18 9
6 32.73 atmosphere 1000.0 10 > th dose independent rect. 20 9
7 32.75 radiation 1.0 10 < th dose dependent rect. 20 18
9 32.85 radiation 1.0 10 < th dose independent rect. 20 18
24 33.34 atmosphere 1000.0 270 > th dose independent rect. 17 22
26 33.43 atmosphere 1000.0 270 > th dose independent rect. 19 19
31 33.51 radiation 1.0 10 < th dose dependent rect. 20 16
35 33.55 atmosphere 1000.0 270 > th dose independent rect. 20 17
36 33.59 radiation 1.0 10 < th dose independent rect. 20 16
44 33.68 radiation 1.0 10 < th dose dependent rect. 20 10
45 33.69 radiation 1.0 10 < th dose dependent rect. 20 12
53 33.77 radiation 1.0 10 < th dose independent rect. 20 12
57 33.78 radiation 1.0 10 < th dose independent rect. 20 10
62 33.86 temperature 15.0 90 > th dose independent rect. 9 6
72 34.03 temperature 15.0 270 > th dose independent rect. 7 7
74 34.04 atmosphere 1000.0 10 > th dose independent rect. 20 19
81 34.08 humidity 90.0 90 < th dose independent rect. 9 6
86 34.16 precipitation 0.1 90 < th dose independent rect. 15 18
87 34.16 precipitation 0.1 90 < th dose dependent rect. 15 18
97 34.29 precipitation 0.1 270 < th dose independent rect. 3 15
98 34.29 precipitation 0.1 270 < th dose dependent rect. 3 15
101 34.31 radiation 10.0 270 < th dose independent rect. 17 10
102 34.33 wind 9.0 90 < th dose independent rect. 9 6
108 34.38 radiation 1.0 10 < th dose independent sin 10 NA
114 34.39 radiation 10.0 270 < th dose dependent rect. 18 9
115 34.40 atmosphere 1015.0 90 < th dose dependent rect. 15 18
116 34.41 radiation 1.0 10 < th dose dependent sin 10 NA
122 34.43 precipitation 0.1 10 < th dose independent rect. 5 15
123 34.43 humidity 50.0 270 > th dose dependent rect. 18 9
126 34.43 precipitation 0.1 10 < th dose dependent rect. 5 15
129 34.45 temperature 10.0 270 > th dose independent rect. 18 9
130 34.45 humidity 50.0 270 > th dose independent rect. 18 9
134 34.45 temperature 10.0 270 > th dose independent rect. 3 15
135 34.45 atmosphere 1015.0 270 < th dose independent rect. 3 15
139 34.46 humidity 50.0 10 > th dose dependent rect. 20 9
141 34.48 wind 9.0 270 < th dose independent rect. 18 9
143 34.49 radiation 40.0 90 < th dose independent rect. 15 18
145 34.50 temperature 10.0 10 > th dose independent rect. 20 9
146 34.50 temperature 30.0 10 < th dose independent rect. 20 9
147 34.50 humidity 50.0 10 > th dose independent rect. 20 9
156 34.50 temperature 10.0 10 > th dose independent rect. 5 15
158 34.50 atmosphere 1015.0 10 < th dose independent rect. 5 15
159 34.50 radiation 20.0 10 < th dose dependent rect. 20 9
165 34.52 wind 9.0 10 < th dose independent rect. 20 9
174 34.56 wind 9.0 270 < th dose independent rect. 7 7
185 34.60 temperature 30.0 270 < th dose independent rect. 18 9
186 34.60 temperature 10.0 10 > th dose dependent rect. 20 9
187 34.61 humidity 50.0 90 > th dose independent rect. 9 6
188 34.61 atmosphere 995.0 90 > th dose independent rect. 9 6
189 34.61 precipitation 0.1 90 < th dose independent rect. 9 6
190 34.61 precipitation 0.1 10 < th dose independent rect. 20 9
192 34.61 precipitation 0.1 90 < th dose dependent rect. 9 6
193 34.61 precipitation 0.1 10 < th dose dependent rect. 20 9
194 34.62 wind 9.0 10 < th dose independent rect. 9 7
196 34.63 atmosphere 1015.0 90 < th dose independent rect. 9 6
197 34.63 precipitation 0.1 270 < th dose independent rect. 18 9
198 34.63 temperature 10.0 90 > th dose independent rect. 15 18
199 34.63 precipitation 0.1 270 < th dose dependent rect. 18 9
202 34.65 humidity 50.0 270 > th dose independent rect. 7 7
235 34.69 precipitation 0.1 10 < th dose independent rect. 16 17
237 34.69 precipitation 0.1 10 < th dose dependent rect. 16 17
252 34.72 wind 9.0 90 < th dose independent rect. 15 18
257 34.74 temperature 15.0 270 > th dose independent rect. 9 3
258 34.74 precipitation 0.1 270 < th dose independent rect. 7 7
260 34.74 atmosphere 995.0 10 > th dose independent rect. 5 15
261 34.74 precipitation 0.1 270 < th dose dependent rect. 7 7
286 34.77 radiation 1.0 10 > th dose independent rect. 16 17
299 34.79 atmosphere 995.0 270 > th dose independent rect. 7 7
300 34.79 atmosphere 1015.0 270 < th dose independent rect. 7 7
302 34.79 atmosphere 1000.0 270 > th dose independent rect. 8 18
306 34.80 temperature 15.0 270 > th dose independent rect. 22 15
315 34.82 radiation 40.0 10 < th dose independent rect. 16 17
318 34.83 precipitation 0.1 270 < th dose independent rect. 13 9
322 34.83 temperature 10.0 270 > th dose dependent rect. 2 6
323 34.83 precipitation 0.1 270 < th dose dependent rect. 13 9
328 34.85 wind 1.0 90 > th dose independent rect. 9 6
332 34.86 wind 9.0 270 < th dose independent rect. 22 15
333 34.86 atmosphere 995.0 90 > th dose independent rect. 15 18
336 34.87 humidity 90.0 270 < th dose independent rect. 9 3
337 34.87 atmosphere 995.0 10 > th dose independent rect. 9 7
346 34.88 atmosphere 1015.0 90 < th dose dependent rect. 3 6
350 34.89 atmosphere 1015.0 270 < th dose dependent rect. 3 4
360 34.91 radiation 1.0 30 > th dose independent sin 11 NA
362 34.91 atmosphere 995.0 270 > th dose independent rect. 3 15
364 34.92 radiation 1.0 270 > th dose independent rect. 7 7
370 34.93 humidity 50.0 10 > th dose independent rect. 5 15
372 34.93 atmosphere 1000.0 270 > th dose independent rect. 7 20
373 34.94 radiation 1.0 270 > th dose independent rect. 8 5
374 34.94 humidity 90.0 10 < th dose independent rect. 9 6
382 34.96 temperature 20.0 10 > th dose independent rect. 9 6
383 34.96 temperature 10.0 10 > th dose independent rect. 9 7
385 34.96 atmosphere 1015.0 10 < th dose independent rect. 9 7
386 34.96 precipitation 0.1 10 < th dose independent rect. 9 7
387 34.96 temperature 10.0 10 > th dose independent rect. 16 17
389 34.96 precipitation 0.1 10 < th dose dependent rect. 9 7
402 34.98 radiation 30.0 270 < th dose independent rect. 2 7
404 34.98 wind 1.0 270 > th dose independent rect. 14 16
415 35.00 atmosphere 1015.0 90 < th dose independent rect. 15 18
431 35.03 precipitation 0.1 270 < th dose independent rect. 2 6
438 35.03 wind 9.0 270 < th dose independent rect. 3 15
441 35.03 wind 9.0 270 < th dose independent rect. 17 22
442 35.03 precipitation 0.1 270 < th dose dependent rect. 2 6
446 35.03 atmosphere 995.0 10 > th dose dependent rect. 20 9
448 35.04 wind 9.0 270 < th dose independent rect. 8 18
450 35.04 temperature 10.0 270 > th dose dependent rect. 3 4
457 35.05 atmosphere 995.0 10 > th dose independent rect. 16 17
463 35.06 humidity 50.0 270 > th dose independent rect. 22 15
466 35.07 wind 7.0 270 < th dose independent rect. 9 3
490 35.08 wind 9.0 270 < th dose dependent rect. 8 5
494 35.09 humidity 70.0 270 > th dose independent rect. 2 6
528 35.11 temperature 10.0 1440 > th dose independent rect. 10 6
531 35.11 temperature 10.0 270 > th dose independent rect. 13 9
536 35.11 temperature 10.0 1440 > th dose independent rect. 16 18
556 35.14 wind 1.0 270 > th dose independent rect. 13 8
575 35.15 wind 9.0 270 < th dose independent rect. 19 19
581 35.16 wind 9.0 10 < th dose independent rect. 20 19
586 35.17 atmosphere 1015.0 270 < th dose independent rect. 13 8
594 35.18 wind 7.0 270 < th dose independent rect. 2 6
597 35.18 wind 9.0 30 < th dose independent rect. 5 15
610 35.19 temperature 15.0 270 > th dose independent rect. 8 18
628 35.21 wind 9.0 10 < th dose dependent rect. 20 9
634 35.22 temperature 10.0 270 > th dose independent rect. 2 6
637 35.22 temperature 30.0 270 < th dose independent rect. 2 6
638 35.22 humidity 50.0 270 > th dose independent rect. 2 6
641 35.22 atmosphere 995.0 270 > th dose independent rect. 2 6
642 35.22 atmosphere 1015.0 270 < th dose independent rect. 2 6
644 35.22 humidity 50.0 270 > th dose independent rect. 17 22
653 35.23 humidity 50.0 270 > th dose independent rect. 8 18
654 35.23 temperature 15.0 10 > th dose dependent rect. 5 4
655 35.23 radiation 40.0 270 < th dose dependent rect. 2 7
702 35.24 temperature 10.0 10 > th dose dependent rect. 15 18
719 35.26 precipitation 0.1 270 < th dose independent rect. 22 15
728 35.26 atmosphere 995.0 270 > th dose dependent rect. 17 10
729 35.26 precipitation 0.1 270 < th dose dependent rect. 22 15
731 35.27 precipitation 0.1 270 < th dose independent rect. 15 2
732 35.27 precipitation 0.1 270 < th dose independent rect. 3 4
735 35.27 wind 9.0 270 < th dose independent rect. 13 8
738 35.27 humidity 50.0 10 > th dose independent rect. 16 17
740 35.27 atmosphere 1000.0 10 > th dose independent rect. 22 17
742 35.27 temperature 15.0 90 > th dose independent rect. 20 19
743 35.27 wind 9.0 270 < th dose independent rect. 7 20
745 35.27 precipitation 0.1 270 < th dose dependent rect. 15 2
746 35.27 precipitation 0.1 270 < th dose dependent rect. 3 4
752 35.28 precipitation 0.1 270 < th dose independent rect. 14 5
762 35.28 precipitation 0.1 270 < th dose dependent rect. 14 5
770 35.29 radiation 1.0 270 > th dose independent rect. 9 3
777 35.29 humidity 50.0 270 > th dose independent rect. 19 19
783 35.30 wind 1.0 270 > th dose independent rect. 14 5
794 35.30 wind 9.0 270 < th dose dependent rect. 3 4
795 35.30 wind 9.0 270 < th dose dependent rect. 2 6
797 35.31 temperature 10.0 270 > th dose independent rect. 15 2
799 35.31 atmosphere 1010.0 270 < th dose independent rect. 15 2
803 35.31 temperature 30.0 270 < th dose independent rect. 7 7
808 35.31 temperature 10.0 270 > th dose independent rect. 17 22
816 35.32 wind 1.0 270 > th dose independent rect. 15 2
825 35.32 atmosphere 1015.0 90 < th dose dependent rect. 15 8
841 35.33 atmosphere 1015.0 10 < th dose independent rect. 15 18
846 35.34 temperature 10.0 270 > th dose independent rect. 14 5
848 35.34 atmosphere 1010.0 270 < th dose independent rect. 14 5
860 35.34 wind 9.0 270 < th dose dependent rect. 9 3
869 35.35 radiation 1.0 30 > th dose independent rect. 5 4
870 35.35 radiation 10.0 270 < th dose independent rect. 3 4
884 35.35 temperature 30.0 270 < th dose independent rect. 20 18
905 35.37 wind 9.0 270 < th dose independent rect. 15 2
922 35.38 wind 9.0 270 < th dose independent rect. 14 5
931 35.38 atmosphere 1000.0 10 > th dose independent rect. 9 20
935 35.39 radiation 40.0 270 < th dose independent rect. 15 2
968 35.40 precipitation 0.1 270 < th dose independent rect. 19 19
976 35.40 precipitation 0.1 270 < th dose dependent rect. 19 19
978 35.41 humidity 70.0 270 > th dose independent rect. 3 4