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Os11g0121500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.94 (0.0336) R2 : 0.409
β1 : -1.68 (0.123) R2dD : 0.25 R2D : 0.0796
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.988 (0.0717) R2dN8 : 0.329 R2N8 : 0.159
σ : 0.63
deviance : 182.01
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
151.22 0.578 6.96 -1.74 1.5 -0.885 0.545 -0.876 -1.01 24 0.298 49 -- --
152.38 0.575 6.96 -1.75 1.32 -0.736 -0.273 -- -1.01 23.8 0.2901 39 -- --
151.4 0.573 6.97 -1.77 1.51 -0.892 -- -0.453 -1.02 24 0.29 50 -- --
152.58 0.575 6.97 -1.78 1.51 -0.893 -- -- -1.02 23.9 0.2946 48 -- --
158.47 0.586 6.94 -1.78 -- 0.681 -- -0.786 -1.04 -- 42.12 3 -- --
167.25 0.606 6.95 -1.71 0.467 -- -0.456 -- -0.996 23.9 -- -- -- --
168.13 0.607 6.95 -1.69 0.47 -- -- -- -0.993 23.7 -- -- -- --
157.41 0.584 6.94 -1.69 -- 0.868 -- -- -0.992 -- 70 7 -- --
234.38 0.713 6.94 -- 1.5 -0.888 -- -- -0.845 23.9 0.84 58 -- --
182.01 0.63 6.94 -1.68 -- -- -- -- -0.988 -- -- -- -- --
243.5 0.73 6.9 -- 0.45 -- -- -- -0.805 23.5 -- -- -- --
231.99 0.709 6.89 -- -- 0.715 -- -- -0.806 -- 46.17 5 -- --
256.24 0.747 6.89 -- -- -- -- -- -0.802 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 144.04 temperature 15.0 720 > th dose dependent rect. 4 3
4 144.57 temperature 20.0 90 > th dose dependent rect. 18 10
11 145.85 temperature 10.0 90 > th dose dependent rect. 18 10
15 146.42 temperature 10.0 90 > th dose dependent rect. 4 14
19 146.67 temperature 30.0 720 < th dose dependent rect. 24 3
28 147.16 temperature 20.0 720 > th dose independent rect. 5 2
31 147.31 radiation 40.0 10 < th dose dependent rect. 5 13
40 147.75 radiation 1.0 30 > th dose independent rect. 12 23
43 147.79 temperature 20.0 10 > th dose dependent rect. 20 9
49 148.03 radiation 40.0 30 < th dose independent rect. 5 13
55 148.25 temperature 25.0 270 < th dose independent rect. 7 4
58 148.30 radiation 1.0 30 > th dose independent rect. 12 19
64 148.46 radiation 1.0 30 > th dose independent rect. 12 21
70 148.53 temperature 20.0 10 > th dose independent rect. 20 9
74 148.66 atmosphere 1000.0 90 > th dose independent rect. 18 10
84 148.88 radiation 1.0 10 > th dose dependent rect. 7 5
85 148.92 radiation 1.0 720 < th dose dependent rect. 24 7
94 149.08 temperature 25.0 270 < th dose independent rect. 7 6
106 149.28 temperature 25.0 270 > th dose independent rect. 17 10
108 149.34 radiation 30.0 270 < th dose independent rect. 16 11
111 149.37 radiation 1.0 30 < th dose dependent sin 12 NA
114 149.46 atmosphere 995.0 270 > th dose independent rect. 16 11
117 149.48 temperature 10.0 270 > th dose independent rect. 16 11
119 149.48 temperature 10.0 270 > th dose independent rect. 3 13
120 149.48 atmosphere 1015.0 270 < th dose independent rect. 3 13
122 149.52 wind 9.0 270 < th dose independent rect. 16 11
127 149.56 humidity 60.0 30 > th dose independent rect. 18 11
129 149.58 wind 1.0 270 > th dose independent rect. 16 11
130 149.59 radiation 1.0 30 > th dose independent sin 12 NA
132 149.60 radiation 1.0 30 < th dose dependent rect. 18 11
133 149.61 radiation 1.0 30 < th dose independent sin 12 NA
138 149.69 radiation 40.0 720 < th dose independent rect. 19 14
142 149.76 radiation 10.0 720 < th dose independent rect. 21 10
146 149.80 temperature 30.0 270 < th dose dependent rect. 7 3
148 149.81 temperature 20.0 10 > th dose independent rect. 18 11
155 149.87 temperature 30.0 30 < th dose independent rect. 18 11
159 149.93 radiation 1.0 30 < th dose independent rect. 18 11
167 150.01 radiation 1.0 10 > th dose dependent rect. 9 3
170 150.06 radiation 10.0 10 > th dose dependent rect. 17 19
191 150.16 temperature 30.0 720 < th dose dependent rect. 24 8
198 150.20 temperature 30.0 270 < th dose dependent rect. 8 1
205 150.24 radiation 40.0 270 < th dose dependent rect. 16 11
220 150.38 wind 9.0 270 < th dose independent rect. 3 13
235 150.48 wind 7.0 270 < th dose independent rect. 20 11
244 150.54 precipitation 0.1 270 < th dose independent rect. 16 11
246 150.54 precipitation 0.1 270 < th dose dependent rect. 16 11
270 150.71 radiation 1.0 30 < th dose dependent rect. 18 18
298 150.87 radiation 40.0 10 < th dose dependent rect. 21 23
301 150.90 atmosphere 995.0 270 > th dose independent rect. 3 13
310 150.99 precipitation 0.1 270 < th dose independent rect. 3 13
311 150.99 precipitation 0.1 270 < th dose dependent rect. 3 13
336 151.12 precipitation 0.1 30 < th dose independent rect. 5 13
338 151.12 precipitation 0.1 30 < th dose dependent rect. 5 13
352 151.17 precipitation 0.1 30 < th dose independent rect. 18 11
353 151.17 radiation 20.0 10 < th dose independent rect. 21 23
355 151.17 precipitation 0.1 30 < th dose dependent rect. 18 11
361 151.21 temperature 10.0 720 > th dose dependent rect. 21 10
364 151.24 temperature 10.0 720 > th dose dependent rect. 23 8
366 151.27 wind 7.0 720 < th dose independent rect. 19 5
367 151.27 radiation 40.0 720 < th dose independent rect. 3 6
374 151.30 temperature 20.0 720 > th dose dependent rect. 23 9
387 151.33 radiation 1.0 30 < th dose dependent rect. 15 14
416 151.45 temperature 10.0 30 > th dose independent rect. 5 13
418 151.45 atmosphere 1015.0 30 < th dose independent rect. 5 13
449 151.64 wind 9.0 30 < th dose independent rect. 5 13
458 151.71 wind 9.0 30 < th dose independent rect. 18 11
463 151.72 radiation 1.0 30 < th dose dependent rect. 11 18
467 151.73 wind 9.0 270 < th dose independent rect. 7 13
481 151.82 humidity 50.0 270 > th dose independent rect. 17 10
487 151.85 wind 3.0 30 < th dose independent rect. 5 6
493 151.85 radiation 10.0 10 > th dose dependent rect. 13 23
530 151.96 radiation 1.0 10 > th dose dependent rect. 11 1
573 152.11 precipitation 0.1 720 < th dose independent rect. 19 5
576 152.11 precipitation 0.1 720 < th dose dependent rect. 19 5
585 152.14 humidity 50.0 30 > th dose dependent rect. 18 11
606 152.22 precipitation 0.1 270 < th dose independent rect. 7 13
608 152.22 precipitation 0.1 270 < th dose dependent rect. 7 13
613 152.24 wind 5.0 30 < th dose dependent rect. 5 6
616 152.25 humidity 70.0 270 > th dose independent rect. 20 11
626 152.30 atmosphere 995.0 720 > th dose independent rect. 15 21
634 152.32 precipitation 0.1 720 < th dose independent rect. 24 19
635 152.32 precipitation 0.1 720 < th dose dependent rect. 24 19
654 152.37 radiation 1.0 10 < th dose independent rect. 18 18
657 152.38 atmosphere 995.0 720 > th dose independent rect. 24 19
700 152.46 temperature 10.0 270 > th dose independent rect. 20 11
701 152.46 temperature 30.0 270 < th dose independent rect. 20 11
702 152.46 humidity 50.0 270 > th dose independent rect. 20 11
707 152.46 temperature 10.0 270 > th dose independent rect. 7 13
708 152.46 atmosphere 1015.0 270 < th dose independent rect. 7 13
713 152.49 temperature 10.0 720 > th dose independent rect. 7 5
714 152.49 atmosphere 995.0 720 > th dose independent rect. 7 5
715 152.49 atmosphere 1015.0 720 < th dose independent rect. 7 5
716 152.49 precipitation 0.1 720 < th dose independent rect. 7 5
717 152.49 temperature 10.0 720 > th dose independent rect. 12 19
720 152.49 precipitation 0.1 720 < th dose dependent rect. 7 5
724 152.50 atmosphere 995.0 30 > th dose dependent rect. 18 11
729 152.52 atmosphere 995.0 30 > th dose independent rect. 5 13
749 152.53 radiation 1.0 30 < th dose dependent rect. 15 21
766 152.56 radiation 1.0 720 < th dose dependent rect. 19 5
769 152.57 temperature 10.0 720 > th dose independent rect. 19 5
770 152.57 temperature 30.0 720 < th dose independent rect. 19 5
771 152.57 humidity 50.0 720 > th dose independent rect. 19 5
772 152.57 atmosphere 995.0 720 > th dose independent rect. 19 5
773 152.57 radiation 1.0 720 < th dose independent rect. 19 5
778 152.57 temperature 10.0 720 > th dose independent rect. 24 19
785 152.58 radiation 40.0 720 < th dose dependent rect. 21 10
786 152.59 wind 9.0 720 < th dose independent rect. 7 5
804 152.64 wind 1.0 270 > th dose independent rect. 7 14
824 152.67 radiation 40.0 10 < th dose dependent rect. 5 6
835 152.70 temperature 10.0 1440 > th dose independent rect. 19 10
838 152.70 temperature 30.0 1440 < th dose independent rect. 19 10
842 152.70 humidity 50.0 1440 > th dose independent rect. 19 10
844 152.70 atmosphere 995.0 1440 > th dose independent rect. 19 10
845 152.70 radiation 20.0 1440 < th dose independent rect. 19 10
865 152.70 temperature 10.0 1440 > th dose independent rect. 5 14
900 152.78 radiation 10.0 10 > th dose dependent sin 5 NA
920 152.86 wind 3.0 30 > th dose independent rect. 9 3
938 152.91 wind 9.0 720 < th dose dependent rect. 19 5
965 152.99 radiation 1.0 30 < th dose dependent no NA NA
991 153.02 wind 9.0 720 < th dose independent rect. 19 14