Os11g0121300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0121300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.38 | 0.362 | 9.66 | 0.101 | 1.27 | 0.393 | 0.624 | 0.327 | 0.106 | 10.9 | 20.6 | 93 | -- | -- |
| 59.79 | 0.36 | 9.66 | 0.0579 | 1.28 | 0.362 | 0.738 | -- | 0.105 | 10.9 | 20.77 | 71 | -- | -- |
| 60.44 | 0.365 | 9.66 | 0.184 | 1.26 | 0.39 | -- | 0.536 | 0.12 | 10.9 | 20.6 | 93 | -- | -- |
| 61.92 | 0.367 | 9.67 | 0.0703 | 1.27 | 0.373 | -- | -- | 0.0944 | 10.9 | 20.72 | 67 | -- | -- |
| 147.47 | 0.569 | 9.71 | 0.119 | -- | 0.727 | -- | 0.709 | 0.0177 | -- | 21.6 | 31 | -- | -- |
| 65.58 | 0.38 | 9.65 | 0.142 | 1.35 | -- | 0.746 | -- | 0.168 | 11.1 | -- | -- | -- | -- |
| 67.95 | 0.386 | 9.65 | 0.172 | 1.35 | -- | -- | -- | 0.171 | 11.1 | -- | -- | -- | -- |
| 149.68 | 0.572 | 9.73 | -0.0436 | -- | 0.688 | -- | -- | -0.0355 | -- | 22.1 | 10 | -- | -- |
| 62.05 | 0.367 | 9.67 | -- | 1.27 | 0.382 | -- | -- | 0.0867 | 10.9 | 20.8 | 67 | -- | -- |
| 180.87 | 0.628 | 9.69 | 0.141 | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
| 68.72 | 0.388 | 9.66 | -- | 1.34 | -- | -- | -- | 0.152 | 11 | -- | -- | -- | -- |
| 149.41 | 0.569 | 9.73 | -- | -- | 0.689 | -- | -- | -0.0308 | -- | 22.13 | 10 | -- | -- |
| 181.39 | 0.629 | 9.69 | -- | -- | -- | -- | -- | 0.145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 3 | 51.28 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 14 |
| 5 | 51.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 15 |
| 13 | 52.61 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 21 | 53.54 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 18 |
| 23 | 53.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 24 | 53.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 4 |
| 34 | 54.17 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 36 | 54.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 42 | 54.32 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 46 | 54.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 5 | 21 |
| 49 | 54.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 19 |
| 86 | 54.89 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 8 |
| 88 | 54.89 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 16 |
| 100 | 55.00 | radiation | 1.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 101 | 55.02 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 6 |
| 112 | 55.14 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 7 |
| 133 | 55.30 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 16 |
| 145 | 55.37 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 157 | 55.47 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 176 | 55.53 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 219 | 55.74 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 225 | 55.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 233 | 55.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 241 | 55.80 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 14 |
| 243 | 55.82 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 18 |
| 251 | 55.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 6 |
| 252 | 55.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 258 | 55.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 8 |
| 262 | 55.90 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 268 | 55.92 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 283 | 55.99 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 285 | 56.00 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 7 |
| 307 | 56.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 308 | 56.08 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 309 | 56.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 312 | 56.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 313 | 56.08 | radiation | 20.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 316 | 56.08 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 317 | 56.08 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 321 | 56.09 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 326 | 56.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 17 |
| 330 | 56.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 17 |
| 383 | 56.29 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 20 |
| 387 | 56.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 4 |
| 389 | 56.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 397 | 56.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 17 |
| 400 | 56.35 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 2 | 8 |
| 402 | 56.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 408 | 56.38 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 421 | 56.41 | radiation | 10.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 427 | 56.43 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 5 |
| 433 | 56.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 434 | 56.44 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 435 | 56.44 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 437 | 56.44 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 440 | 56.45 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 448 | 56.47 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 451 | 56.47 | wind | 1.0 | 90 | > th | dose independent | rect. | 2 | 18 |
| 456 | 56.48 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 21 |
| 457 | 56.49 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 7 |
| 458 | 56.49 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 7 |
| 460 | 56.49 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 462 | 56.49 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 464 | 56.50 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 475 | 56.52 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 2 | 6 |
| 479 | 56.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 482 | 56.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 483 | 56.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 486 | 56.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 4 |
| 487 | 56.54 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 493 | 56.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 494 | 56.54 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 502 | 56.55 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 509 | 56.56 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 516 | 56.60 | wind | 1.0 | 90 | > th | dose independent | rect. | 11 | 10 |
| 518 | 56.61 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 5 |
| 519 | 56.61 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 526 | 56.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 8 |
| 527 | 56.63 | radiation | 1.0 | 90 | < th | dose independent | rect. | 2 | 8 |
| 531 | 56.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 559 | 56.66 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 560 | 56.66 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 7 |
| 581 | 56.71 | radiation | 1.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 588 | 56.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 18 |
| 590 | 56.73 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 4 |
| 592 | 56.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 594 | 56.74 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 601 | 56.75 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 17 |
| 604 | 56.76 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 19 |
| 605 | 56.76 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 619 | 56.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 20 |
| 635 | 56.83 | temperature | 20.0 | 10 | > th | dose independent | rect. | 5 | 9 |
| 659 | 56.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 15 |
| 661 | 56.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 666 | 56.89 | radiation | 1.0 | 90 | > th | dose independent | rect. | 5 | 7 |
| 674 | 56.90 | temperature | 20.0 | 10 | > th | dose independent | sin | 5 | NA |
| 675 | 56.90 | radiation | 40.0 | 270 | < th | dose independent | rect. | 4 | 7 |
| 676 | 56.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 711 | 56.95 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 750 | 56.98 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 758 | 56.99 | temperature | 20.0 | 10 | < th | dose independent | rect. | 24 | 14 |
| 765 | 57.00 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 5 |
| 791 | 57.03 | wind | 1.0 | 10 | > th | dose independent | rect. | 12 | 9 |
| 804 | 57.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 1 |
| 830 | 57.07 | temperature | 20.0 | 10 | < th | dose independent | sin | 6 | NA |
| 834 | 57.07 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 849 | 57.08 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 886 | 57.10 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 905 | 57.12 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 908 | 57.13 | temperature | 15.0 | 90 | > th | dose independent | rect. | 11 | 10 |
| 947 | 57.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 20 |
| 954 | 57.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 20 |
| 956 | 57.20 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 994 | 57.23 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 8 |