Os11g0119100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha/beta hydrolase fold-1 domain containing protein.
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Os11g0119100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha/beta hydrolase fold-1 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.31 | 0.391 | 9.43 | -0.961 | 1.49 | -2.37 | -0.645 | -5.51 | 0.14 | 18.3 | 0.7595 | 1385 | -- | -- |
| 82.46 | 0.423 | 9.52 | -1.5 | 1.42 | -1.41 | -0.386 | -- | 0.023 | 18.3 | 2.366 | 1325 | -- | -- |
| 70.16 | 0.39 | 9.41 | -0.912 | 1.5 | -2.53 | -- | -6.05 | 0.155 | 18.4 | 0.6145 | 1391 | -- | -- |
| 82.85 | 0.424 | 9.52 | -1.46 | 1.43 | -1.37 | -- | -- | 0.0298 | 18.3 | 2.474 | 1335 | -- | -- |
| 117.37 | 0.505 | 9.37 | -1.03 | -- | -2.89 | -- | -5.17 | 0.097 | -- | 0.5972 | 5151 | -- | -- |
| 101.96 | 0.473 | 9.49 | -1.22 | 1.61 | -- | -0.111 | -- | 0.199 | 19.1 | -- | -- | -- | -- |
| 101.99 | 0.473 | 9.49 | -1.22 | 1.61 | -- | -- | -- | 0.198 | 19.1 | -- | -- | -- | -- |
| 87.24 | 0.435 | 9.49 | -1.42 | -- | -2.67 | -- | -- | -0.0047 | -- | 2.121 | 2297 | -- | -- |
| 130.65 | 0.532 | 9.49 | -- | 1.51 | -0.754 | -- | -- | 0.224 | 18.6 | 8.918 | 1325 | -- | -- |
| 239.2 | 0.723 | 9.46 | -1.25 | -- | -- | -- | -- | 0.17 | -- | -- | -- | -- | -- |
| 141.05 | 0.556 | 9.46 | -- | 1.63 | -- | -- | -- | 0.334 | 19.1 | -- | -- | -- | -- |
| 138.45 | 0.548 | 9.44 | -- | -- | -2.21 | -- | -- | 0.247 | -- | 2.76 | 854 | -- | -- |
| 280.28 | 0.781 | 9.43 | -- | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.00 | radiation | 1 | 1440 | < th | dose dependent | sin | 22 | NA |
| 2 | 74.08 | radiation | 1 | 1440 | < th | dose dependent | sin | 15 | NA |
| 5 | 74.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 23 |
| 12 | 74.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 20 | 74.33 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 27 | 74.37 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 34 | 74.38 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 11 |
| 59 | 74.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 60 | 74.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 75 | 74.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 88 | 74.54 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 100 | 74.59 | radiation | 1 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 143 | 74.82 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 148 | 74.84 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 161 | 74.86 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 184 | 74.93 | radiation | 1 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 257 | 75.69 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 271 | 75.98 | radiation | 1 | 720 | < th | dose independent | sin | 12 | NA |
| 279 | 76.16 | radiation | 1 | 720 | < th | dose independent | rect. | 16 | 16 |
| 296 | 76.49 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 304 | 76.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 315 | 76.70 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 324 | 76.97 | radiation | 1 | 1440 | < th | dose independent | sin | 14 | NA |
| 335 | 77.15 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 20 |
| 346 | 77.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 380 | 77.67 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 400 | 77.90 | radiation | 1 | 720 | < th | dose independent | rect. | 19 | 23 |
| 402 | 77.92 | radiation | 1 | 1440 | > th | dose independent | sin | 14 | NA |
| 403 | 77.93 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 407 | 77.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 13 |
| 409 | 77.96 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 419 | 77.96 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 420 | 77.96 | humidity | 80 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 421 | 77.97 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 430 | 78.02 | radiation | 1 | 720 | < th | dose independent | sin | 1 | NA |
| 437 | 78.05 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 18 |
| 441 | 78.08 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 494 | 78.21 | radiation | 1 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 506 | 78.23 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 510 | 78.23 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 519 | 78.25 | humidity | 90 | 43200 | < th | dose independent | sin | 14 | NA |
| 529 | 78.26 | humidity | 80 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 530 | 78.27 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 10 |
| 536 | 78.27 | humidity | 80 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 551 | 78.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 13 |
| 563 | 78.37 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 570 | 78.39 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 577 | 78.41 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 578 | 78.42 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 614 | 78.50 | humidity | 90 | 43200 | > th | dose independent | sin | 14 | NA |
| 616 | 78.51 | humidity | 80 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 620 | 78.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 692 | 78.68 | humidity | 80 | 43200 | > th | dose dependent | rect. | 15 | 11 |
| 703 | 78.70 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 709 | 78.71 | radiation | 1 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 779 | 78.86 | humidity | 80 | 43200 | > th | dose dependent | sin | 16 | NA |
| 839 | 78.97 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 841 | 78.97 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 20 |
| 845 | 78.98 | temperature | 20 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 846 | 78.98 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 873 | 79.02 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 880 | 79.02 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 889 | 79.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 11 |
| 897 | 79.04 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 950 | 79.08 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 969 | 79.09 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 7 |