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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0118000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.88 (0.0359) R2 : 0.0036
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.097 (0.0755) R2dN8 : 0.00465 R2N8 : 0.0036
σ : 0.676
deviance : 209.49
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
200.06 0.659 2.91 -0.0706 0.0545 7.91 0.496 -24.6 0.116 15.6 0.1 10 -- --
207.86 0.671 2.87 -0.0366 0.0107 1.17 -0.479 -- 0.111 22.6 0.0001475 5 -- --
200.7 0.66 2.91 -0.0635 0.0699 8.07 -- -25.3 0.116 17.5 0.01113 10 -- --
208.43 0.672 2.88 -0.0127 0.0156 0.883 -- -- 0.106 21.6 0.003674 5 -- --
200.98 0.66 2.91 -0.0647 -- 8.07 -- -25.3 0.117 -- 0.01087 10 -- --
207.91 0.676 2.88 -0.0147 0.00611 -- 0.677 -- 0.0933 14.9 -- -- -- --
209.43 0.678 2.88 0.0012 0.0315 -- -- -- 0.0976 19.4 -- -- -- --
208.46 0.672 2.88 -0.0143 -- 0.888 -- -- 0.102 -- 0.4994 5 -- --
208.39 0.672 2.88 -- 0.0356 0.893 -- -- 0.105 18.3 0.1127 5 -- --
209.49 0.676 2.88 0.000699 -- -- -- -- 0.0971 -- -- -- -- --
209.43 0.677 2.88 -- 0.0315 -- -- -- 0.0974 19.5 -- -- -- --
208.46 0.672 2.88 -- -- 0.884 -- -- 0.104 -- 0.3598 5 -- --
209.49 0.676 2.88 -- -- -- -- -- 0.097 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 184.08 precipitation 0.1 10 > th dose independent rect. 17 9
21 184.08 precipitation 0.1 10 > th dose dependent rect. 17 9
55 190.12 precipitation 0.1 90 > th dose independent rect. 1 2
57 190.12 precipitation 0.1 90 > th dose dependent rect. 1 2
59 190.13 precipitation 0.1 10 > th dose independent rect. 1 1
69 190.13 precipitation 0.1 10 > th dose dependent rect. 1 1
79 190.28 precipitation 0.1 10 > th dose independent rect. 22 4
81 190.28 precipitation 0.1 10 > th dose dependent rect. 22 4
87 190.46 precipitation 0.1 10 > th dose independent sin 17 NA
115 191.18 precipitation 0.1 10 < th dose independent sin 17 NA
116 191.18 precipitation 0.1 10 < th dose dependent sin 17 NA
127 191.36 precipitation 0.1 10 > th dose dependent sin 18 NA
128 192.23 temperature 20.0 90 < th dose independent rect. 18 1
129 192.23 temperature 20.0 90 < th dose dependent rect. 18 1
156 193.68 temperature 20.0 90 < th dose dependent rect. 8 12
190 194.37 temperature 20.0 90 < th dose independent rect. 8 11
210 195.02 temperature 20.0 720 < th dose independent rect. 15 1
220 195.11 wind 7.0 10 > th dose independent rect. 19 3
227 195.11 wind 5.0 10 > th dose dependent rect. 20 1
229 195.11 wind 7.0 10 > th dose dependent rect. 19 3
237 195.15 wind 7.0 10 > th dose independent rect. 19 1
278 195.60 temperature 20.0 10 < th dose dependent rect. 2 1
280 195.63 wind 1.0 30 < th dose dependent rect. 2 4
313 196.48 temperature 25.0 30 < th dose dependent rect. 6 15
326 196.62 wind 3.0 10 > th dose independent rect. 2 1
339 196.93 temperature 20.0 720 < th dose dependent rect. 15 1
383 197.85 wind 1.0 270 < th dose dependent rect. 3 1
388 197.95 precipitation 0.1 10 > th dose independent rect. 1 17
392 197.95 precipitation 0.1 10 > th dose independent rect. 22 20
396 198.00 precipitation 0.1 10 > th dose dependent rect. 1 17
400 198.01 precipitation 0.1 10 > th dose dependent rect. 22 20
410 198.16 wind 1.0 30 < th dose dependent rect. 5 1
411 198.18 humidity 90.0 90 > th dose independent rect. 24 3
424 198.29 temperature 25.0 30 < th dose dependent sin 22 NA
438 198.38 wind 1.0 30 < th dose dependent rect. 2 16
470 198.61 wind 1.0 30 < th dose dependent rect. 5 23
559 199.10 temperature 25.0 10 < th dose independent rect. 12 22
608 199.44 wind 1.0 30 < th dose independent rect. 2 4
655 199.59 wind 1.0 270 < th dose independent rect. 3 1
689 199.60 humidity 80.0 90 > th dose dependent rect. 24 3
722 199.61 humidity 50.0 90 < th dose dependent rect. 13 2
733 199.62 humidity 50.0 90 < th dose independent rect. 13 2
765 199.65 precipitation 0.1 10 > th dose independent rect. 17 1
793 199.65 precipitation 0.1 10 > th dose dependent rect. 17 1
837 199.72 atmosphere 1000.0 90 < th dose dependent rect. 13 1
845 199.74 precipitation 0.1 90 > th dose dependent rect. 16 10
870 199.78 wind 5.0 90 > th dose independent rect. 17 3
887 199.81 atmosphere 1000.0 90 < th dose independent rect. 12 1
898 199.86 temperature 25.0 10 < th dose independent rect. 17 17
899 199.86 wind 1.0 30 < th dose dependent sin 4 NA
900 199.87 wind 1.0 30 < th dose independent rect. 5 1
918 199.90 humidity 90.0 10 > th dose dependent rect. 1 2
951 200.01 temperature 20.0 90 < th dose independent rect. 1 1
982 200.06 precipitation 0.1 10 > th dose independent no NA NA
983 200.06 precipitation 0.1 10 < th dose independent no NA NA
984 200.06 precipitation 0.1 10 > th dose independent rect. 17 15