FiT-DB / Search/ Help/ Sample detail

Os11g0117700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.33 (0.021) R2 : 0.481
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.03 (0.051) R2dC : 0.466 R2C : 0.456
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.183 (0.0442) R2dN8 : 0.0251 R2N8 : 0.0153
σ : 0.396
deviance : 71.56
__
_____
C
peak time of C : 14
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.14 0.364 8.33 -0.365 1.21 0.645 0.298 -1.19 0.242 14.3 92.35 77 -- --
61.73 0.366 8.32 -0.392 1.21 0.609 0.677 -- 0.22 14.4 92.41 81 -- --
60.37 0.362 8.32 -0.35 1.2 0.634 -- -1.33 0.246 14.3 92.28 84 -- --
63.4 0.371 8.32 -0.37 1.19 0.571 -- -- 0.222 14.3 92.79 81 -- --
100.61 0.467 8.36 -0.316 -- -0.745 -- -0.613 0.0953 -- 62 2 -- --
68.05 0.387 8.34 -0.336 1.03 -- 0.451 -- 0.144 14 -- -- -- --
68.83 0.389 8.34 -0.322 1.03 -- -- -- 0.147 14 -- -- -- --
101.73 0.47 8.36 -0.341 -- -0.781 -- -- 0.0934 -- 60.71 21 -- --
66.96 0.381 8.31 -- 1.19 0.52 -- -- 0.256 14.3 92.69 83 -- --
132.29 0.537 8.35 -0.365 -- -- -- -- 0.123 -- -- -- -- --
71.56 0.396 8.33 -- 1.03 -- -- -- 0.183 14 -- -- -- --
104.82 0.477 8.35 -- -- -0.771 -- -- 0.127 -- 61.83 12 -- --
135.8 0.544 8.34 -- -- -- -- -- 0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 53.61 wind 1.0 90 > th dose dependent rect. 12 6
2 54.15 temperature 10.0 1440 > th dose independent rect. 13 6
6 54.15 temperature 10.0 1440 > th dose independent rect. 19 18
9 54.15 atmosphere 995.0 1440 > th dose independent rect. 19 18
10 54.45 temperature 15.0 90 > th dose independent rect. 18 18
12 54.82 wind 7.0 90 < th dose independent rect. 18 18
13 54.99 wind 3.0 90 > th dose independent rect. 12 6
16 55.11 atmosphere 995.0 30 > th dose dependent rect. 12 6
18 55.17 temperature 15.0 270 > th dose independent rect. 6 15
20 55.29 temperature 20.0 90 > th dose independent rect. 12 6
21 55.45 humidity 50.0 270 > th dose dependent rect. 20 10
22 55.48 temperature 10.0 90 > th dose independent rect. 12 6
24 55.48 atmosphere 1015.0 90 < th dose independent rect. 12 6
29 55.53 atmosphere 995.0 90 > th dose independent rect. 18 18
35 55.69 temperature 15.0 270 > th dose independent rect. 16 19
38 55.72 wind 9.0 90 < th dose independent rect. 12 6
55 55.97 wind 7.0 270 < th dose independent rect. 16 19
56 55.98 precipitation 0.1 90 < th dose independent rect. 12 6
58 55.98 precipitation 0.1 90 < th dose dependent rect. 12 6
61 56.04 precipitation 0.1 90 < th dose independent rect. 18 18
62 56.04 precipitation 0.1 90 < th dose dependent rect. 18 18
66 56.09 temperature 15.0 270 > th dose independent rect. 15 21
71 56.19 humidity 50.0 270 > th dose independent rect. 17 17
72 56.22 wind 9.0 270 < th dose independent rect. 6 15
75 56.23 humidity 90.0 270 < th dose independent rect. 11 6
76 56.23 radiation 1.0 270 > th dose independent rect. 11 6
80 56.32 temperature 10.0 270 > th dose independent rect. 10 7
81 56.32 atmosphere 1015.0 270 < th dose independent rect. 10 7
87 56.33 precipitation 0.1 270 < th dose independent rect. 10 7
89 56.33 precipitation 0.1 270 < th dose dependent rect. 10 7
100 56.41 precipitation 0.1 270 < th dose independent rect. 6 15
101 56.41 precipitation 0.1 270 < th dose dependent rect. 6 15
104 56.43 atmosphere 1015.0 90 < th dose independent rect. 18 18
116 56.49 temperature 10.0 270 > th dose independent rect. 21 9
117 56.49 temperature 30.0 270 < th dose independent rect. 21 9
118 56.49 humidity 50.0 270 > th dose independent rect. 21 9
121 56.49 atmosphere 995.0 270 > th dose independent rect. 21 9
122 56.49 radiation 20.0 270 < th dose independent rect. 21 9
126 56.49 temperature 30.0 30 < th dose independent rect. 18 18
129 56.51 humidity 50.0 270 > th dose independent rect. 16 19
132 56.52 precipitation 0.1 270 < th dose independent rect. 16 19
134 56.52 precipitation 0.1 270 < th dose dependent rect. 16 19
140 56.53 radiation 1.0 30 < th dose dependent sin 15 NA
142 56.54 wind 7.0 270 < th dose independent rect. 15 21
143 56.55 atmosphere 995.0 90 > th dose independent rect. 12 6
147 56.57 wind 9.0 270 < th dose independent rect. 21 9
150 56.58 atmosphere 1015.0 270 < th dose independent rect. 6 15
155 56.59 radiation 40.0 270 < th dose dependent rect. 21 9
161 56.64 wind 1.0 270 > th dose dependent rect. 12 3
169 56.67 radiation 1.0 90 > th dose independent rect. 12 18
171 56.69 wind 9.0 270 < th dose independent rect. 10 7
173 56.69 temperature 10.0 90 > th dose dependent rect. 18 18
181 56.72 wind 1.0 30 > th dose independent rect. 18 18
199 56.76 atmosphere 995.0 270 > th dose independent rect. 10 7
214 56.87 precipitation 0.1 270 < th dose independent rect. 21 9
215 56.87 precipitation 0.1 270 < th dose dependent rect. 21 9
219 56.90 radiation 40.0 90 < th dose independent rect. 12 6
244 57.01 temperature 20.0 270 > th dose independent rect. 12 3
254 57.03 humidity 90.0 270 < th dose independent rect. 12 3
263 57.05 temperature 10.0 10 > th dose dependent rect. 19 17
269 57.12 temperature 10.0 270 > th dose independent rect. 12 3
271 57.12 atmosphere 1015.0 270 < th dose independent rect. 12 3
272 57.12 precipitation 0.1 270 < th dose independent rect. 12 3
276 57.12 precipitation 0.1 270 < th dose dependent rect. 12 3
279 57.13 wind 3.0 270 > th dose independent rect. 12 3
283 57.14 humidity 50.0 30 > th dose independent rect. 12 6
287 57.17 radiation 1.0 270 < th dose independent rect. 21 17
295 57.20 wind 9.0 270 < th dose independent rect. 12 3
297 57.21 humidity 90.0 10 < th dose independent rect. 2 10
304 57.26 precipitation 0.1 270 < th dose independent rect. 15 21
305 57.26 precipitation 0.1 270 < th dose dependent rect. 15 21
311 57.30 atmosphere 995.0 270 > th dose independent rect. 12 3
314 57.30 wind 9.0 270 < th dose dependent rect. 6 14
320 57.31 radiation 40.0 270 < th dose independent rect. 17 17
328 57.33 atmosphere 995.0 270 > th dose dependent rect. 12 3
329 57.34 temperature 10.0 10 > th dose dependent rect. 7 5
339 57.39 temperature 20.0 10 > th dose independent rect. 7 5
340 57.39 radiation 1.0 270 > th dose independent rect. 17 18
341 57.39 wind 9.0 270 < th dose dependent rect. 6 5
345 57.41 humidity 50.0 270 > th dose independent rect. 12 3
347 57.42 radiation 30.0 270 < th dose independent rect. 15 10
367 57.48 radiation 1.0 270 < th dose dependent rect. 21 17
370 57.52 radiation 1.0 270 > th dose independent rect. 12 3
408 57.60 temperature 15.0 270 > th dose independent rect. 5 6
422 57.64 temperature 10.0 90 > th dose dependent rect. 12 6
449 57.70 radiation 1.0 90 > th dose independent sin 16 NA
455 57.72 wind 9.0 270 < th dose independent rect. 15 10
462 57.75 humidity 90.0 10 < th dose independent rect. 7 5
463 57.75 radiation 1.0 270 > th dose independent rect. 5 6
476 57.77 wind 7.0 10 < th dose independent rect. 7 5
477 57.77 radiation 1.0 10 > th dose independent rect. 7 5
478 57.77 wind 7.0 270 < th dose independent rect. 5 6
487 57.81 precipitation 0.1 270 < th dose independent rect. 5 6
489 57.81 precipitation 0.1 270 < th dose dependent rect. 5 6
522 57.88 atmosphere 995.0 270 > th dose independent rect. 5 6
523 57.88 atmosphere 1015.0 270 < th dose independent rect. 5 6
524 57.88 temperature 10.0 270 > th dose independent rect. 11 18
528 57.88 wind 9.0 90 < th dose dependent rect. 18 18
534 57.90 temperature 15.0 270 > th dose independent rect. 15 10
542 57.92 temperature 10.0 270 > th dose independent rect. 1 14
543 57.92 atmosphere 1015.0 270 < th dose independent rect. 1 14
555 57.95 wind 9.0 270 < th dose dependent rect. 7 2
556 57.96 radiation 1.0 90 < th dose independent sin 16 NA
559 57.96 atmosphere 995.0 270 > th dose independent rect. 11 18
561 57.97 humidity 90.0 10 < th dose independent rect. 18 18
575 58.01 radiation 1.0 270 > th dose independent rect. 6 4
592 58.08 humidity 50.0 270 > th dose independent rect. 5 6
600 58.09 temperature 10.0 270 > th dose dependent rect. 12 3
607 58.11 humidity 90.0 90 < th dose independent rect. 18 18
616 58.13 precipitation 0.1 10 < th dose independent rect. 7 5
618 58.13 precipitation 0.1 10 < th dose dependent rect. 7 5
622 58.14 wind 9.0 270 < th dose independent rect. 11 18
623 58.14 radiation 1.0 270 > th dose independent rect. 10 20
624 58.15 wind 1.0 10 > th dose independent rect. 7 5
629 58.16 atmosphere 1005.0 270 > th dose independent rect. 12 3
662 58.20 temperature 10.0 10 > th dose independent rect. 7 5
665 58.20 atmosphere 995.0 10 > th dose independent rect. 7 5
666 58.20 atmosphere 1015.0 10 < th dose independent rect. 7 5
679 58.20 temperature 10.0 10 > th dose independent rect. 12 19
709 58.25 atmosphere 995.0 270 > th dose independent rect. 1 14
739 58.31 atmosphere 1015.0 1440 < th dose independent rect. 15 4
747 58.33 temperature 10.0 1440 > th dose independent rect. 8 5
750 58.33 atmosphere 995.0 1440 > th dose independent rect. 8 5
753 58.33 temperature 10.0 1440 > th dose independent rect. 13 19
761 58.35 temperature 15.0 90 > th dose independent rect. 18 9
764 58.36 radiation 1.0 270 > th dose independent rect. 7 2
765 58.36 humidity 50.0 270 > th dose independent rect. 6 4
773 58.38 wind 9.0 270 < th dose independent rect. 1 14
774 58.38 precipitation 0.1 30 < th dose independent rect. 12 19
776 58.38 precipitation 0.1 30 < th dose dependent rect. 12 19
780 58.39 wind 9.0 10 < th dose independent rect. 12 19
800 58.42 temperature 15.0 270 > th dose independent rect. 9 22
816 58.43 precipitation 0.1 270 < th dose independent rect. 11 18
818 58.43 precipitation 0.1 270 < th dose dependent rect. 11 18
856 58.49 humidity 60.0 90 > th dose independent rect. 18 9
896 58.53 precipitation 0.1 270 < th dose independent rect. 1 14
902 58.53 precipitation 0.1 270 < th dose dependent rect. 1 14
910 58.55 temperature 30.0 270 < th dose independent rect. 7 2
925 58.57 precipitation 0.1 270 < th dose independent rect. 7 2
934 58.57 precipitation 0.1 270 < th dose dependent rect. 7 2
935 58.57 radiation 10.0 90 < th dose dependent rect. 17 10
937 58.59 wind 5.0 270 < th dose independent rect. 7 2
946 58.60 radiation 1.0 90 < th dose independent rect. 18 9
953 58.61 wind 9.0 270 < th dose independent rect. 7 2
954 58.61 temperature 10.0 270 > th dose independent rect. 7 2
956 58.61 humidity 50.0 270 > th dose independent rect. 7 2
957 58.61 atmosphere 995.0 270 > th dose independent rect. 7 2
958 58.61 atmosphere 1015.0 270 < th dose independent rect. 7 2
973 58.62 atmosphere 1000.0 30 > th dose independent rect. 12 19
975 58.62 wind 9.0 270 < th dose dependent rect. 16 19
997 58.66 wind 9.0 10 < th dose dependent rect. 7 5