Os11g0116900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to WRKY transcription factor 46 (Fragment).
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Os11g0116900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to WRKY transcription factor 46 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 57.9 | 0.358 | 10.7 | 1.87 | 0.745 | -0.646 | 0.204 | -0.225 | 0.658 | 5.45 | 25.6 | 946 | -- | -- |
| 57.97 | 0.355 | 10.7 | 1.93 | 0.746 | -0.651 | 0.215 | -- | 0.672 | 5.46 | 25.6 | 946 | -- | -- |
| 58 | 0.355 | 10.7 | 1.87 | 0.743 | -0.648 | -- | -0.239 | 0.658 | 5.4 | 25.65 | 943 | -- | -- |
| 58.07 | 0.355 | 10.7 | 1.93 | 0.746 | -0.669 | -- | -- | 0.68 | 5.38 | 25.62 | 946 | -- | -- |
| 69.88 | 0.389 | 10.7 | 1.91 | -- | -0.78 | -- | -0.332 | 0.717 | -- | 25.8 | 508 | -- | -- |
| 70.08 | 0.392 | 10.7 | 1.73 | 0.809 | -- | 0.514 | -- | 0.453 | 6.59 | -- | -- | -- | -- |
| 70.72 | 0.394 | 10.7 | 1.74 | 0.812 | -- | -- | -- | 0.451 | 6.5 | -- | -- | -- | -- |
| 70.07 | 0.39 | 10.7 | 1.98 | -- | -0.795 | -- | -- | 0.727 | -- | 25.72 | 508 | -- | -- |
| 149.45 | 0.569 | 10.8 | -- | 0.822 | -0.202 | -- | -- | 0.323 | 6.08 | 25.4 | 932 | -- | -- |
| 104.99 | 0.479 | 10.7 | 1.76 | -- | -- | -- | -- | 0.468 | -- | -- | -- | -- | -- |
| 150.51 | 0.574 | 10.8 | -- | 0.835 | -- | -- | -- | 0.258 | 6.39 | -- | -- | -- | -- |
| 169.5 | 0.606 | 10.8 | -- | -- | -0.533 | -- | -- | 0.437 | -- | 25.7 | 454 | -- | -- |
| 186.71 | 0.638 | 10.8 | -- | -- | -- | -- | -- | 0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 15 |
| 2 | 57.07 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 3 | 57.08 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 15 | 57.25 | temperature | 30.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 18 | 57.27 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 24 | 57.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 27 | 57.35 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 28 | 57.35 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 30 | 57.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 39 | 57.48 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 47 | 57.53 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 51 | 57.55 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 57 | 57.59 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 70 | 57.67 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 74 | 57.68 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 82 | 57.71 | temperature | 15.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 90 | 57.73 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 95 | 57.74 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 107 | 57.76 | temperature | 30.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 127 | 57.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 19 |
| 131 | 57.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 132 | 57.84 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 141 | 57.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 257 | 58.09 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 292 | 58.16 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 300 | 58.18 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 307 | 58.19 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 315 | 58.21 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 327 | 58.22 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 333 | 58.23 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 335 | 58.24 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 358 | 58.28 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 359 | 58.28 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 386 | 58.32 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 398 | 58.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 425 | 58.35 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 430 | 58.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 508 | 58.42 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 14 | 20 |
| 510 | 58.43 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 525 | 58.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 15 |
| 545 | 58.44 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 546 | 58.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 550 | 58.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 15 |
| 565 | 58.45 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 585 | 58.46 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 591 | 58.47 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 592 | 58.47 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 593 | 58.47 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 594 | 58.47 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 614 | 58.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 631 | 58.48 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 653 | 58.50 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 661 | 58.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 671 | 58.51 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 683 | 58.51 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 15 |
| 691 | 58.52 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 735 | 58.53 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 742 | 58.54 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 8 | NA |
| 759 | 58.55 | temperature | 25.0 | 720 | > th | dose independent | rect. | 5 | 19 |
| 803 | 58.58 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 807 | 58.58 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 3 | NA |
| 856 | 58.59 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 883 | 58.61 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 886 | 58.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 930 | 58.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 931 | 58.64 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 18 |
| 932 | 58.64 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 947 | 58.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 950 | 58.64 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 951 | 58.65 | temperature | 25.0 | 720 | < th | dose independent | rect. | 5 | 19 |