Os11g0116300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Chalcone-flavanone isomerase family protein.
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Os11g0116300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Chalcone-flavanone isomerase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 529.35 | 1.08 | 12.5 | -3.11 | 2.1 | -2.18 | 2.75 | -0.0672 | -0.496 | 8.95 | 72 | 1229 | -- | -- |
| 529.06 | 1.07 | 12.5 | -3.12 | 2.17 | -2.2 | 2.78 | -- | -0.49 | 8.97 | 72.06 | 1203 | -- | -- |
| 554.22 | 1.1 | 12.5 | -3.09 | 2.12 | -2.17 | -- | 0.519 | -0.512 | 8.91 | 72.08 | 1221 | -- | -- |
| 554.93 | 1.1 | 12.5 | -3.02 | 2.11 | -2.14 | -- | -- | -0.492 | 8.91 | 72.12 | 1222 | -- | -- |
| 760.1 | 1.28 | 12.6 | -2.93 | -- | -2.1 | -- | 0.585 | -0.453 | -- | 74 | 1394 | -- | -- |
| 689.2 | 1.23 | 12.5 | -2.68 | 1.89 | -- | 2.53 | -- | -0.22 | 8.11 | -- | -- | -- | -- |
| 708.42 | 1.25 | 12.5 | -2.61 | 1.89 | -- | -- | -- | -0.223 | 8.01 | -- | -- | -- | -- |
| 758.86 | 1.28 | 12.6 | -2.91 | -- | -2.09 | -- | -- | -0.481 | -- | 74 | 1409 | -- | -- |
| 771.3 | 1.29 | 12.4 | -- | 2.22 | -2.62 | -- | -- | -0.107 | 9.1 | 83 | 1142 | -- | -- |
| 903.87 | 1.4 | 12.5 | -2.59 | -- | -- | -- | -- | -0.199 | -- | -- | -- | -- | -- |
| 888.16 | 1.39 | 12.4 | -- | 1.88 | -- | -- | -- | 0.0675 | 8.11 | -- | -- | -- | -- |
| 953.86 | 1.44 | 12.5 | -- | -- | -2.7 | -- | -- | -0.0643 | -- | 84 | 1399 | -- | -- |
| 1081.25 | 1.53 | 12.5 | -- | -- | -- | -- | -- | 0.0883 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 532.13 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 6 | 536.33 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 13 | 539.22 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 32 | 542.43 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 47 | 544.34 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 84 | 547.63 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 90 | 547.87 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 117 | 550.08 | humidity | 90 | 720 | < th | dose dependent | sin | 14 | NA |
| 128 | 550.71 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 147 | 551.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 151 | 551.88 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 18 |
| 164 | 552.54 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 168 | 552.87 | humidity | 60 | 720 | > th | dose dependent | sin | 16 | NA |
| 192 | 553.87 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 204 | 554.42 | humidity | 90 | 1440 | < th | dose dependent | sin | 3 | NA |
| 207 | 554.51 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 216 | 554.80 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 5 |
| 237 | 555.15 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 21 |
| 284 | 556.03 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 287 | 556.06 | humidity | 90 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 298 | 556.25 | humidity | 70 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 307 | 556.40 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 333 | 556.81 | humidity | 80 | 1440 | < th | dose dependent | sin | 9 | NA |
| 336 | 556.82 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 11 |
| 374 | 557.41 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 376 | 557.43 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 382 | 557.54 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 15 |
| 393 | 557.61 | humidity | 50 | 1440 | > th | dose dependent | sin | 1 | NA |
| 502 | 558.41 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 539 | 558.71 | humidity | 50 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 545 | 558.78 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 611 | 559.41 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 5 |
| 612 | 559.41 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 642 | 559.70 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 677 | 560.03 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 2 |
| 742 | 560.76 | humidity | 60 | 1440 | > th | dose dependent | rect. | 7 | 8 |
| 780 | 561.12 | humidity | 70 | 720 | < th | dose independent | rect. | 15 | 18 |
| 853 | 561.70 | humidity | 70 | 720 | > th | dose dependent | rect. | 5 | 19 |
| 983 | 563.03 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |
| 984 | 563.03 | humidity | 50 | 1440 | > th | dose dependent | rect. | 15 | 23 |