Os11g0115800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0115800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.65 | 0.284 | 10.1 | 1.06 | 0.364 | -0.755 | 0.508 | 1.22 | 0.235 | 19.5 | 26.92 | 1206 | -- | -- |
| 36.86 | 0.283 | 10.1 | 0.805 | 0.374 | -0.661 | 0.494 | -- | 0.196 | 19.6 | 26.6 | 1160 | -- | -- |
| 37.25 | 0.284 | 10.1 | 1.06 | 0.368 | -0.754 | -- | 1.26 | 0.252 | 19.1 | 26.6 | 1200 | -- | -- |
| 37.58 | 0.285 | 10.1 | 0.768 | 0.381 | -0.622 | -- | -- | 0.183 | 19.1 | 26.89 | 1175 | -- | -- |
| 43.92 | 0.309 | 10.1 | 1.04 | -- | -0.713 | -- | 1.02 | 0.266 | -- | 26.11 | 1287 | -- | -- |
| 52.45 | 0.34 | 10.1 | 0.592 | 0.373 | -- | 0.349 | -- | 0.18 | 18.2 | -- | -- | -- | -- |
| 52.71 | 0.34 | 10.1 | 0.59 | 0.376 | -- | -- | -- | 0.181 | 17.9 | -- | -- | -- | -- |
| 44.18 | 0.31 | 10.1 | 0.773 | -- | -0.603 | -- | -- | 0.19 | -- | 26.6 | 1278 | -- | -- |
| 51.89 | 0.335 | 10.1 | -- | 0.371 | -0.491 | -- | -- | 0.0479 | 19 | 28.7 | 1161 | -- | -- |
| 60.04 | 0.362 | 10.1 | 0.578 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 61.87 | 0.368 | 10.1 | -- | 0.367 | -- | -- | -- | 0.116 | 18 | -- | -- | -- | -- |
| 58.25 | 0.355 | 10.1 | -- | -- | -0.46 | -- | -- | 0.00421 | -- | 30.3 | 1199 | -- | -- |
| 68.86 | 0.387 | 10.1 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.61 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 7 | 35.50 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 29 | 36.67 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 19 |
| 34 | 36.75 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 36 | 36.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 51 | 37.07 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 52 | 37.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 123 | 37.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 19 |
| 133 | 37.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 161 | 37.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 14 |
| 175 | 37.96 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 223 | 38.12 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 233 | 38.15 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 18 |
| 239 | 38.17 | radiation | 1 | 270 | < th | dose independent | rect. | 5 | 21 |
| 245 | 38.18 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 12 |
| 292 | 38.32 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 4 |
| 299 | 38.34 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 309 | 38.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 383 | 38.42 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 10 |
| 422 | 38.44 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 477 | 38.52 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 492 | 38.55 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 504 | 38.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 546 | 38.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 556 | 38.70 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 21 |
| 572 | 38.74 | humidity | 50 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 596 | 38.80 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 690 | 38.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 18 |
| 794 | 39.07 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |