Os11g0114800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
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Os11g0114800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Tetratricopeptide-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.54 | 0.492 | 5.47 | 0.234 | 2 | -0.893 | 1.18 | -1.37 | -0.0543 | 19 | 35.79 | 70 | -- | -- |
| 113.44 | 0.496 | 5.47 | 0.249 | 2 | -0.828 | 1.02 | -- | -0.0494 | 18.9 | 35.76 | 69 | -- | -- |
| 113.07 | 0.495 | 5.47 | 0.225 | 2 | -0.881 | -- | -1.18 | -0.0545 | 18.9 | 35.74 | 69 | -- | -- |
| 116.01 | 0.502 | 5.47 | 0.235 | 2 | -0.826 | -- | -- | -0.0455 | 18.9 | 35.74 | 69 | -- | -- |
| 136.98 | 0.545 | 5.46 | 0.344 | -- | -2.7 | -- | 0.967 | -0.132 | -- | 2.35 | 794 | -- | -- |
| 128.23 | 0.531 | 5.45 | 0.22 | 2.01 | -- | 1.04 | -- | -0.00265 | 18.4 | -- | -- | -- | -- |
| 130.91 | 0.536 | 5.45 | 0.207 | 2.01 | -- | -- | -- | 0.000682 | 18.4 | -- | -- | -- | -- |
| 129.52 | 0.53 | 5.43 | 0.0731 | -- | -2.69 | -- | -- | -0.124 | -- | 2.28 | 806 | -- | -- |
| 117.46 | 0.505 | 5.47 | -- | 1.99 | -0.789 | -- | -- | -0.054 | 18.9 | 35.17 | 69 | -- | -- |
| 340.8 | 0.863 | 5.41 | 0.154 | -- | -- | -- | -- | -0.0421 | -- | -- | -- | -- | -- |
| 132.04 | 0.538 | 5.46 | -- | 2.01 | -- | -- | -- | -0.0223 | 18.4 | -- | -- | -- | -- |
| 129.53 | 0.53 | 5.44 | -- | -- | -2.7 | -- | -- | -0.137 | -- | 2.03 | 808 | -- | -- |
| 341.42 | 0.862 | 5.42 | -- | -- | -- | -- | -- | -0.0592 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.94 | radiation | 30 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 13 | 107.73 | radiation | 40 | 270 | > th | dose independent | rect. | 9 | 1 |
| 14 | 107.75 | radiation | 30 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 16 | 107.91 | radiation | 20 | 270 | < th | dose independent | rect. | 2 | 11 |
| 23 | 108.10 | radiation | 40 | 270 | > th | dose independent | rect. | 15 | 19 |
| 42 | 108.19 | radiation | 30 | 270 | > th | dose dependent | rect. | 15 | 19 |
| 43 | 108.23 | radiation | 1 | 270 | > th | dose dependent | sin | 5 | NA |
| 53 | 108.61 | radiation | 40 | 270 | > th | dose independent | sin | 11 | NA |
| 54 | 108.61 | radiation | 40 | 270 | < th | dose dependent | sin | 4 | NA |
| 55 | 108.65 | radiation | 30 | 270 | > th | dose dependent | sin | 11 | NA |
| 79 | 108.87 | radiation | 40 | 270 | > th | dose independent | rect. | 14 | 21 |
| 113 | 109.32 | radiation | 1 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 116 | 109.37 | radiation | 1 | 90 | > th | dose dependent | rect. | 8 | 11 |
| 130 | 109.42 | radiation | 20 | 270 | < th | dose independent | rect. | 3 | 14 |
| 139 | 109.75 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 140 | 109.76 | temperature | 20 | 90 | > th | dose dependent | sin | 2 | NA |
| 174 | 110.14 | radiation | 20 | 270 | < th | dose independent | sin | 5 | NA |
| 215 | 110.51 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 14 |
| 220 | 110.55 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 23 |
| 221 | 110.58 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 6 |
| 227 | 110.64 | radiation | 40 | 270 | < th | dose independent | rect. | 9 | 23 |
| 258 | 110.73 | radiation | 20 | 270 | > th | dose independent | sin | 5 | NA |
| 262 | 110.77 | radiation | 40 | 90 | < th | dose independent | sin | 6 | NA |
| 266 | 110.78 | radiation | 1 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 330 | 110.94 | radiation | 30 | 90 | < th | dose independent | rect. | 3 | 20 |
| 359 | 111.03 | temperature | 30 | 90 | < th | dose dependent | sin | 1 | NA |
| 394 | 111.11 | radiation | 40 | 90 | > th | dose independent | sin | 6 | NA |
| 417 | 111.26 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 418 | 111.27 | radiation | 10 | 90 | > th | dose dependent | no | NA | NA |
| 499 | 111.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 508 | 111.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 515 | 111.33 | temperature | 25 | 270 | > th | dose dependent | sin | 6 | NA |
| 645 | 111.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 647 | 111.38 | radiation | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 652 | 111.39 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 713 | 111.48 | radiation | 20 | 270 | > th | dose independent | rect. | 16 | 22 |
| 740 | 111.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 771 | 111.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 778 | 111.58 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 13 |
| 832 | 111.72 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 856 | 111.79 | radiation | 40 | 90 | < th | dose independent | no | NA | NA |
| 886 | 111.82 | radiation | 40 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 974 | 111.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 982 | 112.01 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 22 |