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Os11g0112000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to AIE protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0354) R2 : 0.706
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.22 (0.0867) R2dC : 0.445 R2C : 0.529
β3 : 2.83 (0.222) R2dE : 0.11 R2E : 0.201
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.674 (0.0744) R2dN8 : 0.0681 R2N8 : 0.0523
σ : 0.664
deviance : 203.44
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C
peak time of C : 23.2
E
wheather : humidity
threshold : 64
memory length : 11
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18
open length of G : 2.28

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
187.45 0.643 9.6 -0.00263 2.2 2.74 -1.59 3.54 0.675 23.3 62.26 11 18 2.34
196.64 0.653 9.6 0.00784 2.2 2.88 -1.29 -- 0.665 23.3 63.8 11 18 2.27
197.61 0.655 9.6 0.0735 2.21 2.75 -- 2.72 0.679 23.2 63.23 12 18 2.27
203.27 0.664 9.6 0.0743 2.22 2.82 -- -- 0.68 23.2 63.81 11 18 2.27
352.67 0.875 9.64 0.602 -- 2.45 -- 2.14 0.621 -- 29.06 592 17.8 2.16
262.4 0.759 9.61 0.0576 2.51 -- -1.03 -- 0.683 22.6 -- -- -- --
266.71 0.765 9.61 0.101 2.51 -- -- -- 0.687 22.5 -- -- -- --
259.84 0.751 9.59 -0.0419 -- 2.67 -- -- 0.609 -- 26.62 680 16.2 2.94
203.44 0.664 9.6 -- 2.22 2.83 -- -- 0.674 23.2 64 11 18 2.28
655.12 1.2 9.54 0.146 -- -- -- -- 0.698 -- -- -- -- --
266.98 0.764 9.61 -- 2.52 -- -- -- 0.675 22.5 -- -- -- --
250.16 0.737 9.51 -- -- 2.66 -- -- 0.775 -- 14.08 683 15.7 3.38
655.68 1.2 9.55 -- -- -- -- -- 0.682 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 189.95 humidity 60.0 10 > th dose dependent rect. 18 2
13 196.20 radiation 1.0 90 < th dose dependent rect. 6 14
16 198.24 radiation 1.0 90 < th dose independent rect. 6 14
19 198.63 radiation 1.0 90 < th dose dependent rect. 10 10
26 199.91 humidity 60.0 30 > th dose dependent rect. 8 12
33 201.14 radiation 1.0 90 < th dose dependent rect. 17 3
34 201.17 humidity 70.0 90 > th dose independent rect. 18 2
38 201.34 radiation 1.0 90 < th dose independent rect. 10 10
42 201.54 temperature 30.0 90 < th dose independent rect. 18 2
50 202.68 radiation 1.0 90 < th dose independent rect. 17 3
53 203.13 humidity 80.0 10 > th dose independent rect. 18 2
55 203.32 temperature 30.0 10 < th dose dependent rect. 18 2
63 204.28 radiation 1.0 90 > th dose independent rect. 7 23
87 205.45 precipitation 0.1 90 < th dose independent rect. 20 23
88 205.45 precipitation 0.1 90 < th dose dependent rect. 20 23
98 206.09 radiation 10.0 14400 < th dose dependent rect. 20 1
103 206.21 temperature 15.0 1440 > th dose independent rect. 20 1
109 206.30 temperature 30.0 1440 < th dose independent rect. 20 1
113 206.30 humidity 50.0 1440 > th dose independent rect. 20 1
119 206.30 atmosphere 995.0 1440 > th dose independent rect. 20 1
123 206.30 radiation 1.0 1440 < th dose independent rect. 20 1
143 206.30 temperature 10.0 1440 > th dose independent rect. 21 23
146 206.30 radiation 1.0 1440 < th dose dependent rect. 20 1
158 206.54 humidity 60.0 30 > th dose dependent rect. 6 14
181 207.77 atmosphere 995.0 30 > th dose dependent rect. 19 1
191 208.36 humidity 60.0 30 > th dose dependent rect. 13 7
197 208.54 humidity 80.0 10 > th dose independent rect. 8 12
206 208.87 temperature 10.0 30 > th dose independent rect. 19 1
211 208.87 atmosphere 995.0 30 > th dose independent rect. 19 1
212 208.87 atmosphere 1010.0 30 < th dose independent rect. 19 1
219 208.87 temperature 10.0 30 > th dose independent rect. 20 23
227 208.94 wind 9.0 30 < th dose independent rect. 19 1
230 209.04 wind 1.0 30 > th dose independent rect. 19 1
248 209.48 wind 9.0 30 < th dose independent rect. 20 23
319 210.21 humidity 60.0 90 > th dose dependent rect. 15 5
321 210.22 radiation 40.0 720 < th dose dependent rect. 15 5
325 210.36 wind 9.0 30 < th dose dependent rect. 19 1
342 210.91 radiation 30.0 720 < th dose independent rect. 14 6
389 211.58 humidity 70.0 90 > th dose independent rect. 13 7
421 212.28 humidity 70.0 90 > th dose independent rect. 11 9
473 212.98 radiation 1.0 90 > th dose independent sin 23 NA
498 213.41 radiation 10.0 90 < th dose dependent rect. 5 23
557 214.51 humidity 70.0 90 > th dose independent rect. 15 5
597 215.37 radiation 1.0 90 < th dose dependent sin 22 NA
614 215.74 precipitation 0.1 30 < th dose independent rect. 19 1
615 215.74 precipitation 0.1 30 < th dose dependent rect. 19 1
702 217.35 radiation 1.0 90 < th dose independent sin 22 NA
726 217.84 radiation 10.0 90 < th dose dependent rect. 11 23
727 217.84 radiation 10.0 90 < th dose dependent rect. 15 23
742 218.05 radiation 30.0 720 < th dose dependent rect. 15 12
775 218.59 radiation 40.0 720 < th dose dependent rect. 14 14
802 218.89 radiation 10.0 90 < th dose dependent no NA NA
803 218.90 radiation 10.0 90 < th dose dependent rect. 21 23
811 219.08 radiation 10.0 90 < th dose dependent rect. 17 23
902 219.98 radiation 10.0 10 < th dose dependent rect. 6 23
907 220.00 temperature 10.0 30 > th dose dependent rect. 19 1
917 220.14 radiation 10.0 90 < th dose dependent rect. 9 23