Os11g0110000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0110000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.24 | 0.602 | 4.16 | 1.42 | 0.512 | -0.602 | 0.832 | -2.61 | 0.3 | 12.8 | 69.49 | 4364 | -- | -- |
| 166.05 | 0.6 | 4.16 | 1.47 | 0.497 | -0.673 | 0.741 | -- | 0.455 | 12.3 | 73 | 18772 | -- | -- |
| 166.07 | 0.6 | 4.16 | 1.45 | 0.439 | -0.656 | -- | -2.46 | 0.304 | 12.6 | 69.44 | 3980 | -- | -- |
| 166.57 | 0.601 | 4.09 | 1.51 | 0.511 | -0.835 | -- | -- | 0.624 | 12.2 | 74 | 18756 | -- | -- |
| 177.13 | 0.62 | 4.16 | 1.46 | -- | -0.854 | -- | -2.34 | 0.316 | -- | 69 | 3859 | -- | -- |
| 183.65 | 0.635 | 4.17 | 1.55 | 0.528 | -- | 0.869 | -- | 0.274 | 12.9 | -- | -- | -- | -- |
| 186.76 | 0.64 | 4.16 | 1.58 | 0.526 | -- | -- | -- | 0.278 | 12.6 | -- | -- | -- | -- |
| 179.27 | 0.624 | 4.1 | 1.42 | -- | -1.08 | -- | -- | 0.621 | -- | 74.1 | 19713 | -- | -- |
| 209.23 | 0.674 | 4.16 | -- | 0.353 | -1.27 | -- | -- | 0.514 | 11.8 | 72 | 35992 | -- | -- |
| 204.09 | 0.668 | 4.17 | 1.56 | -- | -- | -- | -- | 0.269 | -- | -- | -- | -- | -- |
| 252.29 | 0.743 | 4.2 | -- | 0.502 | -- | -- | -- | 0.103 | 12.5 | -- | -- | -- | -- |
| 204.32 | 0.666 | 4.25 | -- | -- | -1.47 | -- | -- | 0.1 | -- | 65 | 29717 | -- | -- |
| 268.14 | 0.764 | 4.21 | -- | -- | -- | -- | -- | 0.0962 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.21 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 146.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 3 | 146.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 4 | 149.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 5 | 149.12 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 23 | 13 |
| 6 | 149.17 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 1 | 11 |
| 26 | 150.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 29 | 150.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 30 | 150.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 64 | 152.27 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 73 | 152.43 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 76 | 152.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 99 | 153.25 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 104 | 153.36 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 118 | 153.63 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 125 | 153.74 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 128 | 153.78 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 129 | 153.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 130 | 153.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 15 |
| 138 | 153.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 15 |
| 149 | 154.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 15 |
| 181 | 154.31 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 185 | 154.33 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 187 | 154.33 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 256 | 154.76 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 263 | 154.79 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 285 | 154.98 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 297 | 155.06 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 298 | 155.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 302 | 155.07 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 5 | NA |
| 303 | 155.07 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 5 | NA |
| 304 | 155.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 306 | 155.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 316 | 155.16 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 5 | NA |
| 323 | 155.21 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 3 |
| 330 | 155.26 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 331 | 155.26 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 337 | 155.30 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 341 | 155.32 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 358 | 155.40 | humidity | 90.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 362 | 155.42 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 368 | 155.45 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 380 | 155.56 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 6 | NA |
| 403 | 155.68 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 405 | 155.68 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 460 | 155.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 474 | 156.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 489 | 156.10 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 23 | 11 |
| 519 | 156.25 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 538 | 156.33 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 540 | 156.34 | humidity | 90.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 554 | 156.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 622 | 156.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 625 | 156.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 7 |
| 630 | 156.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 632 | 156.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 650 | 156.81 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 655 | 156.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 659 | 156.83 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 7 |
| 694 | 156.95 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 833 | 157.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 834 | 157.32 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 929 | 157.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 940 | 157.72 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 22 |
| 995 | 157.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 1000 | 157.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 19 |