Os11g0109300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0109300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.64 | 0.303 | 3.13 | -0.114 | 0.0175 | -0.0664 | 0.427 | 0.502 | 0.0428 | 7.93 | 3.121 | 10 | -- | -- |
| 42.51 | 0.306 | 3.12 | -0.124 | 0.0293 | -0.0736 | 0.346 | -- | 0.058 | 10.5 | 3.491 | 13 | -- | -- |
| 42 | 0.304 | 3.13 | -0.103 | 0.0588 | -0.0964 | -- | 0.425 | 0.0494 | 13.5 | 3.386 | 13 | -- | -- |
| 42.9 | 0.305 | 3.12 | -0.115 | 0.0378 | -0.104 | -- | -- | 0.0547 | 13 | 3.499 | 13 | -- | -- |
| 42.1 | 0.302 | 3.13 | -0.105 | -- | -0.0743 | -- | 0.46 | 0.0454 | -- | 3.348 | 17 | -- | -- |
| 42.99 | 0.307 | 3.12 | -0.101 | 0.0227 | -- | 0.373 | -- | 0.0583 | 10.2 | -- | -- | -- | -- |
| 43.42 | 0.309 | 3.12 | -0.0877 | 0.0554 | -- | -- | -- | 0.0579 | 5.98 | -- | -- | -- | -- |
| 42.97 | 0.305 | 3.12 | -0.114 | -- | -0.0899 | -- | -- | 0.0543 | -- | 3.451 | 13 | -- | -- |
| 43.21 | 0.308 | 3.12 | -- | 0.0302 | -0.0804 | -- | -- | 0.0659 | 11.8 | 3.6 | 13 | -- | -- |
| 43.58 | 0.308 | 3.12 | -0.0861 | -- | -- | -- | -- | 0.0591 | -- | -- | -- | -- | -- |
| 43.62 | 0.309 | 3.12 | -- | 0.0541 | -- | -- | -- | 0.0676 | 6.06 | -- | -- | -- | -- |
| 43.26 | 0.307 | 3.12 | -- | -- | -0.0736 | -- | -- | 0.0659 | -- | 3.6 | 13 | -- | -- |
| 43.77 | 0.309 | 3.12 | -- | -- | -- | -- | -- | 0.0687 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.26 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 1 |
| 10 | 35.26 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 19 | 1 |
| 27 | 35.56 | humidity | 90.0 | 90 | > th | dose independent | rect. | 18 | 1 |
| 28 | 35.57 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 18 | 1 |
| 38 | 36.89 | wind | 3.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 65 | 37.82 | wind | 3.0 | 10 | < th | dose independent | rect. | 20 | 1 |
| 92 | 38.45 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 113 | 38.77 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 12 | 8 |
| 144 | 39.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 166 | 39.15 | wind | 1.0 | 270 | < th | dose dependent | rect. | 21 | 2 |
| 183 | 39.26 | humidity | 90.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 187 | 39.27 | wind | 1.0 | 30 | < th | dose dependent | rect. | 23 | 1 |
| 242 | 39.50 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 2 |
| 249 | 39.55 | wind | 1.0 | 30 | < th | dose dependent | rect. | 21 | 3 |
| 314 | 39.77 | wind | 9.0 | 30 | < th | dose dependent | rect. | 19 | 14 |
| 315 | 39.78 | wind | 3.0 | 10 | < th | dose independent | rect. | 16 | 5 |
| 344 | 39.91 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 19 | 2 |
| 363 | 40.03 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 4 |
| 386 | 40.06 | wind | 5.0 | 30 | < th | dose independent | rect. | 19 | 14 |
| 427 | 40.20 | wind | 1.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 446 | 40.27 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 8 | 13 |
| 495 | 40.37 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 510 | 40.42 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 515 | 40.43 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 550 | 40.49 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 2 |
| 553 | 40.49 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 2 |
| 557 | 40.50 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 1 |
| 566 | 40.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 569 | 40.51 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 573 | 40.51 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 579 | 40.51 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 580 | 40.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 601 | 40.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 22 |
| 633 | 40.55 | wind | 1.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 634 | 40.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 636 | 40.55 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 637 | 40.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 2 |
| 641 | 40.55 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 643 | 40.55 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 2 |
| 651 | 40.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 652 | 40.55 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 2 |
| 664 | 40.56 | wind | 7.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 669 | 40.57 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 19 | 4 |
| 677 | 40.58 | wind | 3.0 | 10 | < th | dose dependent | rect. | 16 | 5 |
| 722 | 40.61 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 20 | 1 |
| 731 | 40.62 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 732 | 40.62 | wind | 9.0 | 30 | < th | dose independent | rect. | 21 | 22 |
| 777 | 40.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 21 | 22 |
| 782 | 40.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 21 | 22 |
| 876 | 40.86 | wind | 3.0 | 10 | > th | dose independent | sin | 16 | NA |
| 920 | 40.91 | wind | 5.0 | 10 | < th | dose dependent | rect. | 19 | 8 |
| 943 | 40.94 | wind | 3.0 | 10 | < th | dose independent | rect. | 16 | 17 |
| 956 | 40.95 | humidity | 50.0 | 30 | > th | dose independent | rect. | 21 | 22 |
| 958 | 40.95 | wind | 5.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 961 | 40.95 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 7 |