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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0107700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0244) R2 : 0.0208
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.159 (0.0513) R2dN8 : 0.0268 R2N8 : 0.0208
σ : 0.459
deviance : 96.57
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.12 0.444 3.05 -0.214 0.113 0.438 1.73 1.91 0.153 17.9 8.66 729 -- --
91.14 0.445 3.05 -0.142 0.0673 0.234 -0.642 -- 0.149 6.5 10.08 752 -- --
90.73 0.444 3.06 -0.207 0.166 0.431 -- 0.251 0.153 14.3 5.971 726 -- --
90.55 0.443 3.06 -0.207 0.147 0.436 -- -- 0.156 14.4 6.85 728 -- --
91.22 0.445 3.06 -0.191 -- 0.386 -- 0.228 0.17 -- 6.84 875 -- --
92.02 0.45 3.06 -0.19 0.239 -- -0.423 -- 0.133 7.51 -- -- -- --
92.52 0.45 3.06 -0.199 0.238 -- -- -- 0.134 7.61 -- -- -- --
91.02 0.444 3.06 -0.191 -- 0.395 -- -- 0.157 -- 4.84 897 -- --
91.53 0.446 3.05 -- 0.166 0.456 -- -- 0.162 14.6 4.839 724 -- --
95.56 0.457 3.06 -0.196 -- -- -- -- 0.138 -- -- -- -- --
93.56 0.452 3.05 -- 0.236 -- -- -- 0.156 7.67 -- -- -- --
92.01 0.447 3.05 -- -- 0.397 -- -- 0.175 -- 4.823 910 -- --
96.57 0.459 3.06 -- -- -- -- -- 0.159 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 86.18 humidity 90.0 270 > th dose independent rect. 9 7
6 86.87 temperature 30.0 90 < th dose dependent rect. 14 3
7 87.00 humidity 90.0 270 > th dose dependent rect. 9 7
12 87.19 temperature 30.0 10 < th dose dependent rect. 11 8
13 87.25 radiation 10.0 90 < th dose dependent rect. 15 2
18 87.32 radiation 10.0 270 < th dose independent rect. 8 10
19 87.32 radiation 10.0 270 < th dose dependent rect. 8 9
37 87.56 temperature 20.0 90 > th dose independent rect. 4 1
41 87.57 humidity 80.0 270 > th dose dependent rect. 8 10
42 87.59 wind 3.0 90 < th dose dependent rect. 4 1
48 87.64 wind 9.0 90 < th dose dependent rect. 14 16
50 87.70 radiation 10.0 90 < th dose dependent rect. 14 4
55 87.77 temperature 30.0 270 < th dose dependent rect. 11 5
58 87.78 temperature 30.0 10 < th dose dependent rect. 15 3
75 87.91 temperature 10.0 30 > th dose dependent rect. 6 22
81 87.94 radiation 10.0 90 < th dose independent rect. 15 2
82 87.94 temperature 30.0 30 < th dose independent rect. 4 15
83 87.95 wind 3.0 90 < th dose independent rect. 4 1
87 87.97 temperature 20.0 90 < th dose dependent rect. 12 4
90 87.99 radiation 20.0 270 < th dose independent rect. 1 15
92 87.99 temperature 15.0 90 > th dose dependent rect. 4 1
94 87.99 wind 5.0 270 < th dose dependent rect. 14 2
95 88.00 wind 3.0 270 < th dose independent rect. 14 2
96 88.00 humidity 80.0 270 > th dose independent rect. 1 15
98 88.00 temperature 20.0 10 < th dose dependent rect. 12 5
103 88.01 radiation 10.0 720 < th dose dependent rect. 8 4
106 88.02 radiation 1.0 10 < th dose independent rect. 15 3
113 88.03 radiation 10.0 10 < th dose dependent rect. 15 3
144 88.14 temperature 30.0 30 < th dose independent rect. 15 4
145 88.14 radiation 20.0 270 < th dose independent rect. 23 17
148 88.15 radiation 1.0 10 < th dose independent rect. 5 13
151 88.16 radiation 40.0 270 < th dose dependent rect. 1 15
155 88.17 atmosphere 1015.0 90 < th dose dependent rect. 4 1
160 88.18 temperature 25.0 30 > th dose dependent rect. 4 1
162 88.19 wind 7.0 1440 < th dose independent rect. 5 1
164 88.19 temperature 10.0 1440 > th dose independent rect. 5 1
167 88.19 temperature 30.0 1440 < th dose independent rect. 5 1
171 88.19 humidity 50.0 1440 > th dose independent rect. 5 1
180 88.19 atmosphere 995.0 1440 > th dose independent rect. 5 1
181 88.19 atmosphere 1015.0 1440 < th dose independent rect. 5 1
182 88.19 radiation 20.0 1440 < th dose independent rect. 5 1
191 88.19 humidity 70.0 10 > th dose independent rect. 2 17
192 88.19 temperature 10.0 1440 > th dose independent rect. 6 23
196 88.20 temperature 30.0 30 < th dose independent rect. 15 15
203 88.22 radiation 10.0 720 < th dose independent rect. 8 4
213 88.23 humidity 70.0 90 > th dose dependent rect. 4 14
219 88.25 wind 7.0 30 < th dose dependent rect. 15 3
228 88.27 humidity 70.0 10 > th dose independent rect. 4 15
232 88.28 wind 3.0 90 < th dose independent rect. 14 16
239 88.29 temperature 25.0 270 > th dose dependent rect. 2 2
242 88.30 precipitation 0.1 720 > th dose independent rect. 9 4
244 88.30 precipitation 0.1 720 > th dose dependent rect. 9 4
247 88.31 radiation 1.0 90 < th dose dependent rect. 4 1
250 88.32 humidity 90.0 270 > th dose independent rect. 9 3
254 88.33 precipitation 0.1 90 < th dose independent rect. 4 1
255 88.33 temperature 25.0 270 > th dose independent rect. 2 2
257 88.33 wind 3.0 10 < th dose independent rect. 15 15
260 88.33 precipitation 0.1 90 < th dose dependent rect. 4 1
261 88.33 radiation 20.0 270 < th dose dependent rect. 20 22
271 88.36 humidity 80.0 90 > th dose independent rect. 4 1
278 88.37 radiation 1.0 90 < th dose independent rect. 4 1
282 88.37 humidity 90.0 270 < th dose independent rect. 5 16
289 88.38 temperature 10.0 90 > th dose independent rect. 4 1
291 88.38 temperature 30.0 90 < th dose independent rect. 4 1
292 88.38 humidity 50.0 90 > th dose independent rect. 4 1
295 88.38 atmosphere 995.0 90 > th dose independent rect. 4 1
296 88.38 atmosphere 1010.0 90 < th dose independent rect. 4 1
303 88.38 temperature 10.0 90 > th dose independent rect. 5 23
307 88.39 wind 1.0 30 > th dose independent rect. 4 1
308 88.39 temperature 25.0 270 > th dose independent rect. 1 4
310 88.39 radiation 10.0 90 < th dose independent rect. 14 4
312 88.39 humidity 70.0 10 > th dose independent rect. 10 9
315 88.39 humidity 90.0 720 > th dose dependent rect. 10 1
317 88.39 humidity 60.0 10 > th dose dependent rect. 15 3
319 88.39 radiation 40.0 270 < th dose dependent rect. 23 17
322 88.40 humidity 50.0 90 > th dose dependent rect. 4 1
339 88.42 radiation 1.0 10 > th dose dependent rect. 15 15
340 88.43 wind 3.0 270 < th dose independent rect. 13 5
345 88.43 humidity 70.0 270 > th dose dependent rect. 1 15
355 88.45 humidity 80.0 90 > th dose independent rect. 4 14
356 88.45 temperature 30.0 270 < th dose independent rect. 1 15
364 88.46 precipitation 0.1 720 > th dose independent rect. 9 2
368 88.46 radiation 40.0 270 < th dose dependent rect. 14 1
369 88.46 precipitation 0.1 720 > th dose dependent rect. 9 2
371 88.46 radiation 10.0 10 < th dose dependent rect. 9 9
373 88.46 temperature 10.0 270 > th dose dependent rect. 6 16
376 88.47 radiation 10.0 720 < th dose independent rect. 21 16
381 88.48 humidity 90.0 10 < th dose independent rect. 4 1
383 88.48 atmosphere 1010.0 1440 < th dose independent rect. 19 2
387 88.48 wind 9.0 90 < th dose independent rect. 5 23
388 88.48 precipitation 0.1 90 < th dose independent rect. 5 23
389 88.48 humidity 80.0 270 > th dose dependent sin 0 NA
392 88.48 precipitation 0.1 90 < th dose dependent rect. 5 23
393 88.49 humidity 90.0 270 > th dose independent rect. 14 1
394 88.49 radiation 40.0 270 > th dose independent rect. 15 1
403 88.49 wind 7.0 10 < th dose independent rect. 6 9
416 88.49 humidity 90.0 270 > th dose dependent rect. 14 1
417 88.49 radiation 40.0 270 > th dose dependent rect. 15 1
452 88.51 radiation 10.0 720 < th dose independent rect. 21 21
454 88.52 humidity 80.0 270 > th dose independent sin 3 NA
459 88.52 humidity 50.0 90 > th dose dependent rect. 14 4
465 88.53 temperature 25.0 720 < th dose independent rect. 23 5
471 88.53 radiation 1.0 10 < th dose dependent rect. 5 13
501 88.56 radiation 30.0 90 < th dose dependent rect. 4 14
507 88.57 atmosphere 995.0 90 > th dose independent rect. 5 23
512 88.57 temperature 10.0 30 > th dose dependent rect. 6 9
520 88.58 atmosphere 1005.0 30 > th dose dependent rect. 4 1
526 88.58 radiation 20.0 720 < th dose dependent rect. 21 15
527 88.59 atmosphere 1010.0 1440 > th dose independent rect. 20 1
529 88.59 humidity 70.0 90 > th dose independent rect. 14 3
530 88.59 temperature 20.0 90 < th dose independent rect. 12 4
546 88.60 wind 7.0 90 < th dose independent rect. 6 8
559 88.61 wind 5.0 30 < th dose independent rect. 15 3
586 88.63 humidity 90.0 270 < th dose independent sin 0 NA
601 88.64 humidity 50.0 10 > th dose independent rect. 6 9
605 88.64 radiation 10.0 720 < th dose independent rect. 17 20
606 88.64 radiation 10.0 270 < th dose dependent rect. 8 2
616 88.65 humidity 50.0 10 > th dose independent rect. 15 15
618 88.65 wind 3.0 10 < th dose independent rect. 15 18
628 88.65 radiation 10.0 720 < th dose dependent rect. 21 18
634 88.66 humidity 70.0 10 > th dose independent rect. 8 11
639 88.66 radiation 30.0 270 < th dose dependent sin 4 NA
649 88.67 humidity 90.0 720 < th dose independent rect. 8 9
651 88.67 atmosphere 995.0 90 > th dose dependent rect. 4 1
716 88.71 humidity 90.0 270 > th dose independent sin 0 NA
725 88.71 temperature 30.0 720 < th dose dependent rect. 10 1
738 88.72 wind 1.0 30 > th dose dependent rect. 4 1
741 88.72 humidity 70.0 720 > th dose dependent rect. 4 7
744 88.72 temperature 30.0 10 < th dose dependent rect. 8 11
745 88.73 temperature 25.0 720 < th dose independent rect. 1 3
766 88.74 wind 1.0 30 < th dose independent rect. 5 7
786 88.75 temperature 30.0 10 < th dose independent rect. 11 8
798 88.76 wind 5.0 30 < th dose independent rect. 15 1
808 88.76 radiation 10.0 720 < th dose dependent rect. 4 15
819 88.77 humidity 70.0 10 > th dose independent rect. 24 19
850 88.79 radiation 10.0 720 < th dose independent sin 0 NA
855 88.79 atmosphere 995.0 10 > th dose independent rect. 15 15
858 88.79 radiation 1.0 10 > th dose dependent rect. 15 4
869 88.79 temperature 30.0 30 < th dose dependent rect. 4 15
874 88.80 radiation 10.0 30 < th dose independent rect. 16 12
880 88.80 radiation 1.0 90 < th dose dependent rect. 4 4
904 88.82 wind 1.0 90 < th dose independent rect. 10 2
930 88.83 wind 3.0 10 > th dose independent rect. 19 16
941 88.83 radiation 1.0 90 < th dose dependent rect. 4 7
953 88.84 humidity 90.0 720 < th dose independent rect. 6 12
958 88.84 wind 3.0 90 < th dose independent rect. 14 19
964 88.84 humidity 90.0 270 > th dose dependent rect. 12 4