Os11g0107500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Macrophage migration inhibitory factor family protein.
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Os11g0107500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Macrophage migration inhibitory factor family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.22 | 0.333 | 11 | -0.0393 | 1.31 | 0.804 | 0.134 | 0.513 | -0.916 | 16 | 83.02 | 5705 | -- | -- |
| 50.61 | 0.331 | 11 | -0.06 | 1.31 | 0.83 | 0.123 | -- | -0.925 | 16 | 83 | 5690 | -- | -- |
| 50.27 | 0.33 | 11 | -0.0369 | 1.31 | 0.801 | -- | 0.507 | -0.918 | 16 | 83.33 | 5695 | -- | -- |
| 50.65 | 0.331 | 11 | -0.0594 | 1.31 | 0.83 | -- | -- | -0.925 | 16 | 83 | 5691 | -- | -- |
| 92.76 | 0.451 | 11 | -0.154 | -- | 1.43 | -- | -0.149 | -0.811 | -- | 88.01 | 6274 | -- | -- |
| 60.34 | 0.364 | 11 | -0.0846 | 1.28 | -- | 0.0587 | -- | -0.812 | 16.1 | -- | -- | -- | -- |
| 60.35 | 0.364 | 11 | -0.0839 | 1.28 | -- | -- | -- | -0.812 | 16.1 | -- | -- | -- | -- |
| 92.8 | 0.451 | 11 | -0.152 | -- | 1.43 | -- | -- | -0.811 | -- | 88.01 | 6274 | -- | -- |
| 50.75 | 0.332 | 11 | -- | 1.31 | 0.829 | -- | -- | -0.924 | 16 | 83.41 | 5692 | -- | -- |
| 149.66 | 0.572 | 11 | -0.136 | -- | -- | -- | -- | -0.846 | -- | -- | -- | -- | -- |
| 60.54 | 0.364 | 11 | -- | 1.28 | -- | -- | -- | -0.802 | 16.1 | -- | -- | -- | -- |
| 93.42 | 0.452 | 11 | -- | -- | 1.43 | -- | -- | -0.794 | -- | 88.01 | 6274 | -- | -- |
| 150.15 | 0.572 | 11 | -- | -- | -- | -- | -- | -0.831 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.30 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 2 | 47.74 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 4 | 47.81 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 5 | 48.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 6 | 48.11 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 7 | 48.22 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 35 | 48.45 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 19 | 14 |
| 36 | 48.51 | humidity | 50.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 56 | 48.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 57 | 48.60 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 59 | 48.65 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 63 | 48.70 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 64 | 48.72 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 66 | 48.74 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 169 | 48.99 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 170 | 49.00 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 171 | 49.02 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 174 | 49.03 | humidity | 50.0 | 14400 | < th | dose dependent | no | NA | NA |
| 296 | 49.04 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 302 | 49.10 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 308 | 49.18 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 340 | 49.22 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 21 |
| 341 | 49.22 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 10 | 2 |
| 343 | 49.24 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 363 | 49.27 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 365 | 49.32 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 369 | 49.36 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 383 | 49.45 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 384 | 49.45 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 22 |
| 398 | 49.53 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 410 | 49.55 | humidity | 50.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 413 | 49.55 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 421 | 49.57 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 439 | 49.64 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 448 | 49.66 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 19 |
| 473 | 49.81 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 476 | 49.82 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 565 | 49.87 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 607 | 49.94 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 18 | 22 |
| 609 | 49.94 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 614 | 49.97 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 640 | 50.00 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 672 | 50.04 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 718 | 50.08 | humidity | 50.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 727 | 50.09 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 13 |
| 734 | 50.09 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 772 | 50.12 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 778 | 50.12 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 789 | 50.13 | humidity | 50.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 804 | 50.15 | humidity | 50.0 | 43200 | > th | dose independent | no | NA | NA |
| 808 | 50.15 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 3 | 19 |
| 844 | 50.16 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 884 | 50.18 | humidity | 50.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 887 | 50.18 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 948 | 50.20 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 952 | 50.20 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 955 | 50.21 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |